Halorhabdus sp. SVX81: SVXHr_1258
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Entry
SVXHr_1258 CDS
T09281
Symbol
cafA
Name
(GenBank) Ribonuclease G and E
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hasv03009
]
SVXHr_1258 (cafA)
Ribosome biogenesis [BR:
hasv03009
]
Prokaryotic type
rRNA processing factors
SVXHr_1258 (cafA)
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Gene cluster
GFIT
Motif
Pfam:
DUF402
S1
Motif
Other DBs
NCBI-ProteinID:
WEL17429
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All DBs
Position
complement(1285388..1286815)
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AA seq
475 aa
AA seq
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MATRRSEFPDSMTDGESVTVRVRGIYATALTERLSAADGVTVVQASPPIQKRFETTFADE
PADVRIETDGQRRGISIVGTQLGVERVRESLDVAIDTLGWADPPSQGAIFDGVVTETLGS
GAVVDLGEREGFLPFHATAAHVETDDLLRVQVAEPAAPWSDDRPALDTTLSVRGDMATLV
REEPTDAAGPDLLDVLSVDVPDGWRVSWGRDADDADFDALEASLDGLIDRAVEIDDALAA
HDERTTTGRIVDGRGTQWVLFGRESRFALDEDRREVTPTMPGHHRIKAGDERASAAVDFV
EELAPDLDGTFPFDVVTRQFGPQVGDRVSITHGKPDGRTVSLGRGEVTERDPAGTIRVER
EMSPGGTYDALGTKRRAGDVAVTKFTEGKWWYPTVYRGEDGQKRGTYVNVCTPVEVFPGE
VQYVDLHVDVVKHRDGTVERVDDDELDAAVGAGNVPEALAEKAREVASAVESALS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgtcgatcggagttccccgatagtatgaccgacggagagtcagtcaccgta
cgagtacgcggtatctacgcgacagcacttaccgaacgcctgagcgcggcggacggtgtc
accgtcgtccaggcatcccctcccattcagaaacgcttcgagacgacgttcgccgacgaa
ccggccgacgtgcggatcgaaaccgacggccagcgacgggggatcagtatcgtcggaacg
caactcggcgtcgagcgcgttcgtgagagcctcgatgtggcgatcgacacgctcggctgg
gcagatccgccgtcccagggcgcgatcttcgatggtgtcgtcaccgagacgctggggagc
ggagccgtcgtcgatctgggcgagcgcgaggggtttctccccttccacgcgaccgctgca
cacgtcgaaaccgacgacttgctccgggtgcaggtcgccgaaccggcggccccctggagc
gacgaccgcccggcactcgatacgacgctatcggttcgtggcgacatggcgacactggtc
cgcgaggagccgacggacgcggcgggcccggacttgctcgacgtcctctccgtcgacgtg
cccgacggctggcgggtctcctggggtcgggacgccgacgacgccgacttcgacgcgctc
gaagcgagcctcgatggattgatcgatcgagccgtcgaaatcgacgacgcactggcggcc
cacgacgaacgcacgacgaccggtcggatcgtcgacggtcgcgggacacagtgggtactc
tttggccgtgaatcccgcttcgctctcgacgaggatcgccgggaagtgacgccgacgatg
ccgggccatcaccgcatcaaggcgggcgacgagcgagcgagcgccgccgtggacttcgtc
gaggaactcgccccggacctcgatggaacgttcccgttcgacgtcgtgacccgacagttc
ggcccgcaagtgggtgatcgtgtctccataactcacggcaagccggacggtcggacagtc
agtctcgggcgcggcgaggtgaccgaacgcgacccggcggggaccatccgcgtcgagcgc
gagatgtcgcccggtgggacctacgacgcgctgggcacgaagcgccgggcgggcgatgtc
gccgtcacgaagttcaccgaagggaagtggtggtatccgacagtctaccggggcgaagac
gggcaaaagcgcgggacgtacgtcaacgtctgtacgccagtcgaggtgttccccggggag
gtgcagtacgtcgatctccacgtcgacgtggtcaaacacagagacgggacggtcgagcgg
gtggacgacgacgaactcgacgcggctgttggggcaggcaacgtccccgaggcactcgcc
gagaaggcccgcgaggttgcgagtgcggtcgagagcgcgctgtcgtga
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