Halorhabdus sp. SVX81: SVXHr_1572
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Entry
SVXHr_1572 CDS
T09281
Symbol
rfcL
Name
(GenBank) Replication factor C large subunit
KO
K04800
replication factor C large subunit
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SVXHr_1572 (rfcL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hasv03032
]
SVXHr_1572 (rfcL)
DNA replication proteins [BR:
hasv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
SVXHr_1572 (rfcL)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_16
DNAX_ATPase_lid
AAA_assoc_2
AAA_30
AAA_14
AAA_25
nSTAND3
AAA_5
AAA_28
AAA_2
VapE-like_dom
IstB_IS21
RNA_helicase
DUF815
AAA_24
NACHT
AAA_33
ATPase_2
Bac_DnaA
Mg_chelatase
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WEL17739
LinkDB
All DBs
Position
complement(1586912..1588393)
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AA seq
493 aa
AA seq
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MTDWTEIHRPSTLAEVRGNDKARDALREWAESWPDHREAVVLYGSPGIGKTSAAHALAND
MDWPTIELNASDSRTKDVIEQVAGEAAKSGTLAQGGSGRRLVILDEADNLHGNVDRGGTR
AITALVKEAQQPIVLIANEFYEMSKGLRNACRDIEFRDVSTRSIVPVLRDICRQEDVGFE
KEALRKIAEMNDGDLRGAINDLQAIAEGRDTVTEDDVVTSERDRTTDIFSFLDTVLKEAD
AQEALEASYDVDETPDDLISWIEDNVPKDYEGAELARAYRSLANADRWLGRVRATQNYSF
WRYASDAMTAGVAAARSGEKGGWTRYGPPSYWSKLGRTRGARDTRDDVARAIATTSGVSM
STARREVLPYLETMTHHCKNRELTVSMTAAYDLDADHVAFITGSGADTNKIASIIEDAAE
RRETAAVDASEGAFDPGETDSSSAQGTDGEQRDGQPEPIDSQEAEERSAPDEAETSVEED
EADDQQTGLGDFV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgactggacggagattcatcgtccttcgacgctcgcggaggtgcggggcaacgac
aaggcccgcgacgcccttcgggagtgggccgagtcctggcccgaccaccgcgaggcagtc
gtcctctatggctcgcctggcatcgggaagacctcggcggcccacgcgctcgccaacgac
atggactggccgacgatcgaactcaacgccagtgactcccggaccaaagacgtcatcgag
caggtcgcgggcgaggctgccaaaagcggtacgctcgcccagggtggttcgggccggcga
ctcgtcatcttggacgaggccgacaacctccacggcaacgtcgaccgcggcgggacgcgg
gcgatcacagccctggtcaaggaggcccaacagccgatcgtcctcatcgccaacgagttc
tacgagatgagcaagggcctccggaacgcctgccgggacatcgagtttcgggacgtctcc
acccggtcgatcgtccctgtcctccgtgatatctgccgacaggaggatgtcggcttcgag
aaggaggcactccgaaagatcgcggaaatgaacgacggtgatcttcggggagcgatcaac
gatctgcaggccatcgcggagggccgggacacggtgaccgaagacgacgtcgtgaccagc
gaacgcgaccggaccactgacatcttttcgtttctcgataccgtcctgaaggaagcagac
gcccaggaagccctcgaagcgtcctacgacgtcgacgagacgcccgacgacctcatctcc
tggatcgaggacaacgtgcccaaggactacgagggcgcggaactcgcgcgagcctaccgt
tcgctcgcgaacgccgaccggtggctcggtcgcgtgcgggccacccagaactactccttc
tggcgatacgcctccgacgccatgacggccggcgtcgccgccgcccggagcggtgagaag
ggcggctggacgcgctatggcccgccgagctattggtcgaagctcggtcgaaccaggggc
gcacgggacacgcgcgacgatgtcgcccgcgccattgcgacgaccagcggcgtcagcatg
tccaccgcgcgccgcgaggtgttgccgtatctggagacgatgacccaccactgcaagaac
cgcgagttgacggtttcgatgactgccgcctacgatctcgacgccgaccacgtggcgttc
attacgggcagcggtgcggacacgaacaagatcgcctcgatcatcgaggacgcggcagaa
cgccgggaaacggccgccgtcgacgcctcggaaggcgcgttcgacccgggtgaaaccgac
agttcgtcggcccagggcactgacggtgagcaacgggacggccaaccggaaccgatcgac
tcacaagaagccgaggaacgcagtgctccggacgaggctgagacgagcgtcgaggaagat
gaggccgacgatcaacagaccggtctcggcgacttcgtctag
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