Halorhabdus sp. SVX81: SVXHr_1629
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Entry
SVXHr_1629 CDS
T09281
Symbol
idsA2
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv00900
Terpenoid backbone biosynthesis
hasv01100
Metabolic pathways
hasv01110
Biosynthesis of secondary metabolites
Module
hasv_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SVXHr_1629 (idsA2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hasv01006
]
SVXHr_1629 (idsA2)
Enzymes [BR:
hasv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SVXHr_1629 (idsA2)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SVXHr_1629 (idsA2)
2.5.1.29 geranylgeranyl diphosphate synthase
SVXHr_1629 (idsA2)
Prenyltransferases [BR:
hasv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SVXHr_1629 (idsA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WEL17796
LinkDB
All DBs
Position
complement(1643798..1644724)
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AA seq
308 aa
AA seq
DB search
MTDEEDVFAWLQDEVKPTVDDRIRQWLEEFEYAERLWYPIDTGGKRIRPGLVFLVSEMVD
VPQADALDIAAGVELLHNFTLVHDDIIDGDEYRRGEPTLWAEHGEGSAINLGDMMFAKAI
LCFPAETRDLALDTVITVTNGEQMDIDFADRRDTTVEEYMTMVRRKTGALLELCVDAPLA
LADSDLDLSGFTSLGPAFQIRDDLLDFQEGKGREQIGNDVRAGKRTLMVVHADDERVYDI
LDKPFDETTKEDVRTVMQILEAEGSMAFAEQRMNDLIEEARGAITELPDSPQREKLQALG
QFITERDV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaagaagacgtcttcgcctggttgcaagacgaggtcaaaccgacggtcgac
gatcgaatacgccagtggctcgaggagttcgagtacgccgagcgcctctggtatccgatc
gacaccggcggcaagcgcatccgaccggggctcgtgttcctcgtctcggagatggtcgac
gtcccgcaggcggacgcactcgacatcgccgcaggggtcgaactcctccacaacttcacg
ctggtccacgacgacatcatcgacggcgacgagtatcgtcgcggcgaacccacgttgtgg
gccgaacacggcgaggggagcgcgatcaacctcggcgatatgatgttcgcgaaggcgatc
ctgtgtttccccgccgaaacccgtgatctcgcgctcgatacggtcatcacggtcaccaac
ggcgagcagatggacatcgacttcgccgaccgtcgtgacaccaccgtcgaggagtacatg
acgatggtccggcgcaagacgggcgcgctgctggaactctgtgtcgacgcgccgctggcc
ctcgccgactcggacctcgacctctccggattcacgtcgctagggccggccttccagatc
cgggacgatctgctggacttccaggagggcaagggccgcgagcagatcggcaacgacgtc
cgggccggcaaacggacgctgatggttgtccacgccgacgacgagcgagtgtatgacatc
ctcgataaaccgttcgacgagacgaccaaggaggacgtccggacggtcatgcaaatcctg
gaagccgaggggagcatggcgttcgccgagcagcggatgaacgacctgatcgaggaggct
cgcggggcgatcaccgagctcccggactcgccacagcgggagaaactccaagctctcgga
cagttcattaccgaacgggacgtctag
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