Halorhabdus sp. SVX81: SVXHr_1636
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Entry
SVXHr_1636 CDS
T09281
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hasv03009
]
SVXHr_1636 (ycaO)
Ribosome biogenesis [BR:
hasv03009
]
Prokaryotic type
ribosomal protein modification factors
SVXHr_1636 (ycaO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Peptidase_A21
Motif
Other DBs
NCBI-ProteinID:
WEL17803
LinkDB
All DBs
Position
complement(1651426..1653138)
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AA seq
570 aa
AA seq
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MSVGLVGAGPAVEAVESALGDVDSAVSTCEPDEIEDYDLGIVVDVAGAGTFERANERALE
TEASWIAIELGGVGGVPVVDAAITGFGPETACYECLRKRVRANVDPAEEPTEAPPPTTAR
FAGAIAGRVAASTLDRSVDAPEVFGFVTEIPDATRRLLPVPHCTCGTEPSRTIERTAVDR
DLEATIARAEQGLDDRLGIVQEVGEIESFPAPYYLARNGDTDGFSDVSSTGPAAGVDVNW
NAALMKALGEAYERYSAGVYRRESFRTATIEELARPIAPSSFVTPEPPGDGPYDWIEGQD
LATGQGVQVPASVTVYPPSDDRFRPANTTGLGFGNAMVEALLSGLYEVIERDASMLSWYS
TFEPLELDVSDDRFETLARRVNVEGLSVTPLLLTQDIDVPVVAVAVHRADGEWPRFALGS
SANLDPAAAARSALAEAVQNWFELRQMGPDGAVDASGAIGDYATFPDVVADFVDAAGTVP
AADVAPDAPDDGGEALSAVVERVTDAGLSPYAVRLTPRDIEAIGFEAVRVLVPSAQPLFL
GDPYFGERLETVPDRLGFEARPDRAFHPFP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttggtctcgtgggtgccggtccggccgtcgaggcggtcgaatccgcgctcggt
gacgttgatagcgccgtgtcgacgtgtgaacccgatgaaatcgaggactacgacctgggg
atcgtcgtcgacgttgccggtgcaggcacgttcgaacgggcgaacgagcgcgcgctcgaa
acagaagcatcctggatcgcgatcgaactcggcggtgtcggcggcgtcccggttgtcgac
gccgcgatcaccggatttgggccggagacagcgtgttacgagtgtctccgcaagcgcgtc
cgggcgaacgtcgatccggcggaggagccgacggaagccccaccgccgacgacggcacgg
ttcgccggggcaatcgccggccgggtggctgcgagcacgcttgatcgctccgtcgacgct
ccggaggtcttcgggttcgtaacggaaattccggatgcgacgcgccgcttgctccctgtc
ccgcactgtacatgcgggacggagccgtcacggaccatcgagcgaacggccgtcgaccgc
gaccttgaggcgacgatcgcgcgggccgagcaggggctcgatgaccgtctcgggatcgtc
caggaggtcggcgagatcgagtccttccctgccccctactacctcgcccggaacggcgac
acggacgggttcagcgacgtctcctcgactggcccggccgcgggcgtcgacgtcaactgg
aacgctgcactgatgaaagcgctcggggaagcctacgagcgatacagtgccggcgtctat
cggcgtgaaagcttccggacagccaccattgaggagctggcccgaccgatcgcgccgtcg
tcgttcgtgacgccggagccgcccggagacggcccttatgactggatcgaggggcaggat
ctcgcaaccggccagggggtgcaggtgccggcgtcggtgaccgtctatccgccgtccgac
gatcgcttccggcccgcgaacacgaccgggctcggctttggcaacgcgatggtcgaggcg
ttgctgtcgggactgtacgaggtgatcgagcgcgacgcgtcgatgctgtcgtggtattcg
acgttcgaaccgctggaactcgacgtttcggacgatcgtttcgagacgctcgccaggcgg
gtaaacgtcgaggggctctcggtcacgccactcctgctcacccaggatattgacgtgccg
gtcgtggcggttgccgtccaccgggcggacggcgagtggccccggttcgccctcggatcg
agcgcgaatctcgatcccgccgccgctgcgcgctcggcgctggccgaagcggtccagaac
tggttcgaactccgccagatggggccggacggtgccgtcgacgccagcggcgcgatcggt
gactacgcgacattccccgacgttgtcgcggacttcgtcgacgccgcgggcactgtcccg
gcagccgatgtcgcacccgatgcgcccgacgatgggggtgaggcgctgtcggccgtcgtc
gaacgggtcaccgacgccggtctctcgccgtacgcggtgcgacttacgccccgcgacatc
gaagcgatcggattcgaggccgttcgcgtgcttgttccgtcggcccagccgctgtttctc
ggcgatccgtacttcggtgaacgactcgaaacagtcccggaccgtctcggattcgaggca
cggccggaccgtgcgttccatccgttcccttga
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