Halorhabdus sp. SVX81: SVXHr_1691
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Entry
SVXHr_1691 CDS
T09281
Name
(GenBank) S-layer protein
Organism
hasv
Halorhabdus sp. SVX81
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GFIT
Motif
Pfam:
CARDB
PTHB1_GAE
Archaeal_Ig
CLIPPER_2
NPCBM_assoc
CLIPPER
Motif
Other DBs
NCBI-ProteinID:
WEL17858
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Position
complement(1712954..1715776)
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AA seq
940 aa
AA seq
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MTAIVLTTMIVGSTVAGVVSFGVGVARAANVTTVEGTPDLSASAPDARLDPGESGSISIY
LENDATFGSNGTYTEEMRDRVTEARSISVNVTDTRGAPLTVETDAQPAGTLQDGNASDPQ
VFSVVVDEDAAAGTYELEVTSVYRHTSRATYEKGETGEYRLRDETTAERSDTDTITVEIQ
PQPRFEVEAVSHDVPLGGEGTVAVEMSNAGDEDVTEATVSLSSGDSNLYFGSGTATAEAN
VGSWGADESKTLRFRAGTADSAVAREYPVDVTVEYVDSDDAQQTASESIGITPRNRTRFD
VVNVTHDVPRNGEGTLTVSLQQMARKTIEDVTVTASTTATDVYLGGESSRSSTTAIGTWH
ENETRNVTVRVGTTDDALARPYPIDLEFEYTDAADNDNTRTEFLQFVPGEHDDFSLVSRT
HDVPTNGVGTLTVVVDNVAETNFSDVSVTASTPDSEIYVGSESSRSGTATVSEWGVNDTR
RLTFRVGATANAVNRSYPLNVDFEYTDADDNDNQWTTEVAFRPSGEPQFVVESIDHDVPV
GSSGRVTLTLRNDGPVNATQSVVTASSDADAMFFGTGGAEPIEAQGVTVEPPQTGTPTAQ
SYVGEWAVGETRTVSFRAGFDDDAIVREYVANLAVAYENEAGDDMPEQTRAVGITPLPEQ
RFSFDRLRSDLFVGEEGNLHVSVTNTGNRSVEGLVVTASTQDRNVNFYNSRYAVGSLSPN
ESATVRYRVGVTEEAEHGPRIFELSARYRDPQMDVRQTDTRDVTVTIGASRDAFALERTT
GTLAPGESGPLTLTVTNRRNETLSNIQASLFTDDPLDSGDDSAFISALDPGESTTITLDI
TADGSASEKTYSASMEFRFDDERGESALSDTYRIPVVIERTESSLGVPVVLGGVGALVAI
IALGWYVGAASRLRAIGSRLRQRVTSGNGSSDRLDVDESE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcaatcgttctcaccacgatgatcgtcggaagtaccgtggcgggcgtcgtctcg
ttcggtgtgggcgttgcgcgtgccgctaacgtcacgactgtcgaagggacgccggacctc
tccgcgtcggcccccgacgctcgtctcgaccctggtgagagtgggtccatctcgatctac
ctcgaaaacgatgcgactttcgggagtaacggcacctacaccgaggagatgcgcgaccgt
gtcacagaggcccgttcgatttccgtcaacgtcactgataccaggggtgcgccgctcact
gtcgagaccgacgcccaacccgccggcacactgcaggacgggaacgcgtccgacccgcag
gtgttcagtgtcgtcgtcgacgaggacgcagcggccggaacgtacgaactcgaggtcacc
agcgtgtatcggcacacgtcacgcgccacctacgagaaaggcgaaaccggcgagtaccgg
ctgcgagacgagacgaccgccgagcgctccgatacggacacgatcaccgtcgagatccag
ccacaaccccgcttcgaggtcgaggccgtctctcacgacgtcccgctgggcggtgagggg
accgtcgccgtcgagatgagcaacgccggcgacgaggatgtgacggaggcgacagtctcg
ctgtcttcgggggactcgaacctgtatttcgggtccggaaccgcgacagcggaggcaaat
gtcggttcgtggggggcagatgaatccaaaacgctccggttccgtgcggggactgctgac
agcgccgtggcccgggagtatccggtcgacgtgacggtcgagtatgtcgacagcgacgac
gcccagcagacggcgagcgagtcgatcgggatcacgccgcggaaccggacccggttcgac
gtggtcaacgtcacccacgacgtgccccgcaatggggaggggacactgacggtctcactc
cagcagatggcacgcaagacgatcgaagacgttaccgtgacggcctcgacgaccgcgact
gacgtctacctcggcggcgagtcctcacggtcgtcgacgactgccatcgggacgtggcac
gaaaacgagaccaggaacgtgacggttcgggtcggaacgaccgacgatgcactcgcccga
ccgtatccgatcgacctcgagttcgagtacactgacgccgccgataacgacaacacccgg
accgagttcctccagttcgtcccgggcgaacacgacgatttttcgctggtcagtcgcacc
cacgacgtgcccacgaacggcgttgggacgctcactgtcgtcgtcgacaatgttgctgaa
acgaacttttcggacgtttcggtgacggcgtcgacgccggactcggagatctatgtcggt
tccgagtcctcccggtcagggactgctaccgtctctgagtggggagtgaacgacacccgt
cggcttacctttcgggtcggcgcgaccgcgaacgccgtcaatcggtcctaccccctgaac
gtggacttcgagtacactgacgctgacgacaacgacaatcaatggaccaccgaggtcgcg
ttcagaccctccggcgaaccacagttcgtcgtcgagtcgatcgaccacgacgtccccgtg
ggaagcagcggtcgggtgacgctgacgcttcggaacgatgggccggtgaacgcgacccag
tctgtcgtgacggccagttcggacgccgacgcgatgttcttcggcacgggcggggccgaa
cccatcgaagcgcagggcgttaccgtcgagccgccacagaccgggacgccgaccgcccaa
tcctacgtcggcgagtgggcagtcggtgagacccggacagtttccttccgggcaggcttc
gacgacgacgccatcgtccgggagtacgttgcgaacctggcggtcgcttacgagaacgag
gctggcgacgatatgccggagcagacgcgagcggtcggtatcacgccgctcccggaacaa
cggttcagtttcgaccgcctccggagtgacctcttcgtcggggaggaaggcaacctgcac
gtttcggtgaccaacaccggaaatcgctccgtcgagggcctggtcgttacggcctcgacc
caggatcggaacgtcaacttttacaacagccgctatgctgtcgggtcactcagcccgaac
gagtccgcgaccgttcgctaccgtgtcggcgtcaccgaggaagccgagcacggccctcgt
atcttcgaactctccgcccgctatcgggatccacagatggacgtccgacagaccgataca
cgcgacgtgactgtcaccatcggggccagtcgcgacgccttcgcactcgaacggacaacc
gggacgttggcccccggcgagtccgggccactgacgctgacggtcaccaaccgtcgcaac
gagacgctgtcgaacatccaggcgagtctcttcaccgacgacccactcgacagcggcgac
gattcggcgttcatctcggcactcgaccccggcgagtcgacgacgatcacactcgatatt
acggccgacgggagcgctagtgaaaagacctattcggcctcgatggagttccggttcgac
gacgagcgtggcgagagcgccctctcggatacgtaccgtatccctgtcgtcatcgagcgg
acggagtcatcgctcggggtccccgtcgtgctcggcggtgtcggcgcactcgtcgccatc
atcgcccttgggtggtacgtcggcgcagcctctcgactacgggccatcgggagtcgtctg
cgccagcgagtgacttcggggaatggatccagcgaccgactggacgtcgacgaatccgag
tga
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