Halorhabdus sp. SVX81: SVXHr_1842
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Entry
SVXHr_1842 CDS
T09281
Symbol
smc
Name
(GenBank) Chromosome segregation ATPase
KO
K03529
chromosome segregation protein
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hasv03036
]
SVXHr_1842 (smc)
Chromosome and associated proteins [BR:
hasv03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SVXHr_1842 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
ATG16
CCDC39
AAA_15
FKBP15
AAA_23
AAA_13
AAA_29
AAA_21
EzrA
CENP-F_leu_zip
Fib_alpha
DUF1664
DUF7121
DUF724
DUF3450
Rod_CreS
DUF4407
Class_2_docking_dom
HAUS-augmin3
Fez1
HH_AprE
Laminin_II
MscS_porin
CCDC113_CCDC96_CC
Exonuc_VII_L
APG6_N
Motif
Other DBs
NCBI-ProteinID:
WEL18004
LinkDB
All DBs
Position
complement(1864125..1867691)
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AA seq
1188 aa
AA seq
DB search
MYITEVVLDNFKSFGRKTRIPFYEDFTTISGPNGSGKSNIVDAILFALGLARTSGIRAEK
LTDLIYNPGHQDGESPDREREASVEVVLDNSDRTLSRSQVVSAAGSENVGDVEEITIKRR
VKETDDNYYSYYYINGRSVNLGDIQDLLAQAGVAPEGYNVVMQGDVTEIINMTAGARREI
IDEIAGVAEFDQKKAQAFEELDVVEDRIEEADLRIEEKETRLEQLEDERETALEYQELRD
EKEEYEAYQKAAELEDKRDDLDAVREEIADLEETLEDRQRELDEREGKVVRLEDELAELN
AEIERKGEDEQLALKREIEEIKGEIARLEDAIESAEEKRDEAEARRREAFVEIDRKQETI
DDLEADIRETKVEKSSVKAEIDDLEVDLAAVQEEIEEVGAEFEEVRDELEAKKASLEDAK
ERRNDLQREQDRLLDEARRRSNQQRELESTIEDLQESIPELDAEIADLEEERRKAEQNRE
TITDVIDDLAAEKRDLQAEIEEIDDDLEAARQEYAELEARAAESGDASYGRAVTTVLDGD
LDGVHGTVGQLGGVDPTYATACETAAGGRLANVVVDDDGIGQRCIEYLKNRNAGRATFLP
LTEMDDRSLPSLPSHDGVVDFAYNLVDFDPEYSGIFSYVLGDTLVVEDMATARELMGRYR
LVTLEGELVEKSGAMTGGSSSGSRYSFSDSEGQLQRVAERITELEDERQEYREELGDVEE
RLEDARDRKSEAADQVREIQAEIERREREREETEERIEQRREELEEIEEEREAVSAEMDE
IEADIESAESEIDALEGEIDDLEAEIEDSRLPALTDEAESLESEIDEREDELDDLDAALN
ELQLEKQYAEDAIEDLHDEIETAQNRKAEQAERIEELNETVAEEESKLADKQDAVAELEA
ELADLKSDREDLREELQAAQEERDEQKDRVNEIESKLDGKRETESRLEWEIDELEDAVGQ
YDPEEIPDHHTVQTRIGQLEAEMERLEPVNMLAIEEYDEVAADLADLEDKRGTLVEEADG
IRERIDSYEAKKKETFMEAFETIDAQFQDIFERLSNGTGRLHLENEDDPFDGGLTMKAQP
GDKPIQRLNAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANADLVGEMVDEL
AGDAQFVVVSHRSAMLERSERAIGVTMQGDNVSSVTGIDLTEEVPADD
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtacattacagaggtcgtcctcgacaacttcaagagcttcggacgaaagacgcgcatc
cccttttacgaggactttacgaccatcagcggcccgaacgggtcgggcaagtcaaacatc
gtcgatgcgatcctcttcgcactcggactcgcccgcacctcggggatccgcgccgagaag
ctgaccgacctcatctacaatcccggccatcaggacggcgaatcaccggatcgcgaacgc
gaggcgagcgtcgaggtcgtactggacaacagcgaccggacgctttcgcggtcgcaagtc
gtcagtgctgccgggagcgagaacgtcggcgacgtcgaggagatcacgatcaagcgccgg
gtcaaggagaccgacgacaactactactcctattactacatcaacggtcgctcggtcaac
ctcggggacatccaggacttactcgcccaggccggcgtcgcgcccgagggctacaacgtc
gtcatgcagggcgacgttacggagatcatcaacatgactgcgggcgctcgccgggagatc
atcgacgagatcgccggcgtcgcggagttcgaccagaagaaggcccaggccttcgaggaa
ctcgacgtcgtcgaggaccggatcgaagaggccgacctccggatcgaggagaaggagacc
cgcctcgaacaactcgaagacgaacgcgagacggccctggagtaccaggaactcagagac
gagaaagaggagtacgaggcctaccagaaggctgccgaactcgaggacaagcgcgatgat
ctcgacgcggtccgggaggagatcgcggacttagaggagacgctcgaggatcgacagcgc
gaactcgacgagcgtgagggcaaggtcgtccggctggaggacgaactcgccgagttgaac
gccgagatcgagcgcaagggcgaggacgaacagctcgcactcaaacgcgagatcgaggag
atcaaaggcgagatcgcccgactcgaggacgctatcgagagcgccgaggagaagcgtgac
gaggcagaggcacggcgacgcgaggcgttcgtcgagatcgaccgcaagcaggagaccatc
gacgatctggaagccgatatccgggagacgaaagtcgagaagtcctccgtgaaagccgag
atcgacgatctcgaggtcgatctcgcggccgtccaggaggagatcgaggaagtcggcgcg
gagttcgaggaagtcagagacgaactcgaagcgaagaaggcgagcctcgaagacgcaaag
gagcgacgcaacgacctccagcgcgagcaggatcggctgctcgacgaggcgcgccggcgc
tcgaaccagcaacgcgagctcgaatccacgatcgaggatctccaggagtcaatccccgaa
ctcgacgccgagatcgcggatctcgaagaggagcgccggaaggcagagcagaaccgcgag
acgatcacggacgtgatcgacgatctcgccgcggagaaacgcgacctccaggccgaaatc
gaagagatcgacgacgatctggaggccgcccgacaggagtacgccgagctcgaagcccgg
gccgcggagtccggcgacgcctcatatggtcgggcggtcacgaccgtcctcgatggggat
ctcgacggcgtccacggaacggtcgggcaactcggcggggtcgatccgacctacgcgacg
gcgtgtgagacagcggctggcggccgactcgcgaacgtcgtcgttgatgatgacggcatc
ggccagcggtgtatcgagtatctcaagaaccgcaacgccggccgggccacgttcctcccg
ctgacggagatggacgaccggtcactgccgtcgctgcccagccacgatggtgtcgtcgac
ttcgcgtacaacctcgtggacttcgaccccgagtattcgggcatattcagttacgtcctc
ggggacacgctggtcgtcgaggacatggctacggcccgggagctgatgggccggtatcgg
ctggtcaccctcgagggagaactcgtcgagaagagcggcgcgatgaccggcggatcctcg
agcgggtcgcgatactccttctcggacagtgagggccaactccagcgggtcgccgaacgt
atcaccgaactcgaagacgagcgccaggagtaccgcgaggaactgggggacgtcgaggag
cgactcgaagatgcccgcgaccgcaagtccgaggccgccgatcaggtccgggagatccag
gccgagatcgagcgccgtgagcgcgaacgcgaggagaccgaggagcgaatcgaacagcgc
cgcgaggaactcgaagagatcgaggaggaacgcgaggccgtctccgcggagatggacgag
atcgaggccgacatcgagtcagccgagagcgagatcgacgccctggagggcgagatcgac
gacctggaagccgagatcgaggactcccgacttcccgcgctgaccgacgaggccgaatcg
ctggagagcgagatcgacgagcgcgaggacgaactcgacgatctggacgcggcgctgaac
gaactccagctcgaaaaacagtacgccgaggacgcgatcgaggatctccacgacgagatc
gagacggcacagaaccgcaaggccgaacaggccgagcgcatcgaggagctgaacgaaact
gtcgccgaggaggagtcgaaactcgccgacaaacaggacgctgtcgccgaactcgaggcc
gaactcgccgacctcaagagcgaccgtgaggacctccgcgaggaactccaggctgcccag
gaggaacgcgacgagcagaaagaccgggtcaacgagatcgagtcgaagctcgacgggaaa
cgcgagaccgaatcccgcctggagtgggagatcgacgaactcgaagacgccgtcggtcag
tacgaccctgaggagatcccggatcaccacacggtccagacgcggatcggccaactcgag
gcggagatggaacgcttagagccggtcaacatgctcgccatcgaggagtacgacgaggtc
gcggccgacctcgcggatctggaggacaaacgtgggacactcgtcgaggaagccgacggg
atccgtgagcggatcgactcctacgaggccaaaaagaaggagacgttcatggaggccttc
gagacgatcgacgcccagttccaggacatcttcgagcgactctcgaacgggacggggcga
ctccacctcgaaaacgaggacgatcccttcgacggcgggctgacgatgaaggcccagccc
ggcgacaagccgatccagcggctgaacgcgatgagtggcggcgagaagtccctgactgcg
ctggccttcatctttgcgatccagcgacacaatccggcgccgttctacgcgctggacgag
gtcgacgcgtttctcgacgccgccaatgccgatctcgtcggcgagatggtcgacgaactc
gccggtgacgcccagttcgtcgtcgtttcccatcgctcggcgatgctggagcgctccgag
cgagccatcggcgtcacgatgcaaggtgacaacgtgagtagcgtgacggggatcgatctg
accgaggaggtgcccgcggatgactga
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integrated database retrieval system
