Halorhabdus sp. SVX81: SVXHr_1847
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Entry
SVXHr_1847 CDS
T09281
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hasv03032
]
SVXHr_1847 (topA)
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_1847 (topA)
Enzymes [BR:
hasv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SVXHr_1847 (topA)
DNA replication proteins [BR:
hasv03032
]
Prokaryotic type
DNA Topoisomerases
SVXHr_1847 (topA)
DNA repair and recombination proteins [BR:
hasv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SVXHr_1847 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
HHH
Toprim_4
Toprim_2
DNA_pol_lambd_f
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
WEL18009
LinkDB
All DBs
Position
1870680..1873214
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AA seq
844 aa
AA seq
DB search
MRLIVTEKDNAARRIAEILSGDSASGERRNGVNVYKWGGQRVVGLSGHVVGVDFPPEYSE
WRDVEPAELIDADVVTTPTRENIVATLRSLARKADEVVIATDYDREGELIGKEAYELIRE
ETDAPVERVRFSSITEREVQKAFENPDEIDFDLAAAGEARQIVDLIWGAALTRFLSLSAK
QLGNDFISVGRVQSPTLKLIVDREREIEAFDPDDYWEILADLAKDGQGFEAQYFYDDDGS
EAERVWDEAAAEAAYADLSESGTATVTEVRRRTRTDDPPAPFNTTAFISAASSLGYSAQR
AMSLAEELYTDGYLTYPRTDNTVYPDDLDPGELLGAFEGSYEFGDDAESLLAQDEIEPTR
GETESTDHPPIHPTGELPDRNEIGADAWEIYELVVRRFFATVAEPATWAHLRVVAEAAGR
SLKANGKRLLEAGYHAVYPYSSAGETVVPAVEEGEELSIDDVELEAKQTQPPRRYGQSRL
IQHMEEMGIGTKATRHNIVEKLYDRGYVEDDPPRPTKLADAVVTAAEEYADHVVSEEMTA
QLEADMTAIAEGEATLEEVTEESREMLGDIFEELRESREEIGEFLQESLKADRTLGPCPE
CGQDLLVRRSRQGSYFVGCDGFPECRFTLPLPSSGEPQVMDETCEDHDLREVKMLAGRDT
FVHGCPRCKAEAADESEDEVIGDCPECGDGTGPEGQRNEGGEAAEGEGGELAIKHLRSGS
RLVGCTRYPDCDYSLPLPRRGEIVVTDERCEEHDLPHIEIHDGEDDDPWELGCPICNYEE
FQARNAVENLEDLDGVGPATAEKLQDAGVADPEDLHEVDPDAVAGEVQGVSADRIREWQA
ELAT
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatcgtcaccgagaaggacaacgccgccaggcggatcgccgagatattgagc
ggcgattcggcgagtggtgagcggcgaaatggcgtcaacgtctacaagtggggcggccag
cgcgtcgtcggcctctccgggcatgtcgtcggcgtggacttcccgccggagtattccgaa
tggagggacgtcgaaccggccgagttaatcgacgccgatgtcgttacaacgcccacgcgg
gagaacatcgtcgcgacactccgtagcctcgccagaaaggccgacgaggtcgtgatcgcg
acagactacgaccgcgagggcgaactcatcgggaaggaagcctacgagttgatccgcgag
gagaccgacgcgccggtcgaacgcgtgcgcttctcctcgatcaccgagagagaagtccag
aaggccttcgagaatcccgacgagatcgacttcgacctcgccgccgcaggcgaagcccgc
cagatcgtcgacctgatctggggagcagcgctgacccgcttcctctctctgtctgccaag
cagctcggcaacgacttcatctccgtcggccgggtccagagcccgacgctgaagctgatc
gtcgaccgcgagcgcgagatcgaggccttcgatcccgacgactactgggagatcctcgcc
gacctcgcgaaggacggccagggcttcgaggcccagtacttctacgacgacgacggcagc
gaagccgagcgggtctgggacgaagcggccgccgaagctgcctacgcggatctctccgaa
tccgggacggccaccgtgaccgaagttcggcggcgaacgcgcaccgacgacccgcccgcg
ccgttcaacacgacagcgttcatctccgcggcgagttcactcggctactccgcccagcgc
gccatgtcgctggccgaggaactctatacggacggctacctgacctacccacggacggac
aacactgtctacccggacgatctcgatcccggagagctattaggtgccttcgaaggcagt
tacgagttcggcgacgacgccgagtccttgctcgcccaggacgagatcgagccgactcgt
ggggaaaccgaatcgaccgaccaccccccgatccacccgaccggggagcttcccgatcgc
aacgagatcggcgcggacgcctgggagatctacgagctcgtcgtgcggcgctttttcgcg
accgtggccgagccggcgacctgggcgcacctgcgggtcgtcgccgaggcggcgggccgg
tcgctgaaggccaacggcaagcgcctgctcgaagcgggctatcatgcggtctatccctac
tcctccgccggcgaaactgtcgttcccgctgtcgaggaaggagaagagctgtcgatcgac
gacgtcgaactggaagccaagcagacccagccgccgcgacggtacggccagtcacgactc
atccagcacatggaggagatgggcatcgggacgaaggccacgcgacacaacatcgtcgaa
aagctctacgatcgggggtacgtcgaggacgacccgccgcggccgacaaagctcgccgat
gcagtggtcacggccgccgaggagtacgccgatcacgtcgtcagcgaggagatgaccgcc
cagctcgaggccgacatgactgccatcgccgagggcgaggcgaccttagaagaggtgacc
gaagaatcgcgggagatgctcggcgatatcttcgaggaactgcgcgagtcccgcgaggag
atcggcgagttcctccaggagtcgctgaaggccgaccggacgctcggcccctgtccggag
tgtggccaggacctgctggtccgccggagtcgccaggggtcgtacttcgtcgggtgtgac
ggcttccccgagtgtcggttcaccctcccactgccgagtagtggtgaaccacaggtgatg
gacgagacctgcgaggaccacgaccttcgggaggtcaaaatgctcgcgggtcgggacacg
ttcgtccacggctgtccgcggtgtaaagccgaggcagccgacgagagcgaggacgaggtg
atcggggactgtcccgaatgtggggatggcactgggccggaggggcagcgaaacgaaggc
ggcgaagccgccgaaggggagggtggcgaactcgcgatcaagcacctccggtcggggtcg
cgactggtcggctgtacgcgctatcctgactgtgattactcgctcccgctcccccgtcgt
ggtgagatcgtcgtgaccgacgagcgttgcgaggagcatgacctgccacacatcgaaatc
cacgacggcgaagacgacgatccctgggaactgggctgtccgatctgcaactacgaggag
ttccaggcgcgcaacgccgtcgagaacttggaggacctcgacggggtcggcccggcgacg
gcggagaaactacaggacgctggcgtagcggaccccgaggacctccacgaggtggacccg
gacgccgtcgccggcgaggtccagggcgtcagcgccgatcgcatccgagaatggcaagcc
gaactcgcgacttaa
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