Halorhabdus sp. SVX81: SVXHr_1878
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Entry
SVXHr_1878 CDS
T09281
Symbol
xynB2
Name
(GenBank) Xylan 1,4-beta-xylosidase, glycosyl hydrolase family 43
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv00520
Amino sugar and nucleotide sugar metabolism
hasv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
SVXHr_1878 (xynB2)
Enzymes [BR:
hasv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
SVXHr_1878 (xynB2)
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
Laminin_G_3
Big_6
Motif
Other DBs
NCBI-ProteinID:
WEL18040
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Position
1902844..1904325
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AA seq
493 aa
AA seq
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MQYDNPIIPGFHPDPTICRVEDTFYLATSSFEYFPGVPLYRSQNLTDWEPIGHALTRDDQ
LPLEGARSSMGIFAPTLRHHDGTFYMVTTNVTNGGHFFVTADDPAGEWSDPTWVDAPGID
PDLFFDDGTCYFTYHADDPDAPIKQAELDLETGELGEPYPVWEGFRDPYAEAPHVIERDG
TYYLLVAEGGTHAGHMVVAARADDPAGPYEGCPDNPVLTHWGRPRDEIRATGHADLTVDG
NGQWWLVFLGIRQHSMWPRFHHLGRETFLAPVSWEDGWPVVNGGEPVTTEMDAPLPGEPR
DDVTSVDRTDTTFADGLGVEWEFRRNPDRERYETGPDGLTLHGGPETLDEPGATFVGRRQ
TAFDCSAEATLAFDPDEDEEAGLALVMNEDHHYQVGVTQQDGRREAVVRLRIGDATEVVG
RAPVGSTTDLAVEADTQTYRFLVDGEEVATASTRYLATEVADGFTGVMIGPYATGRGRTC
ESNAVVERFVYES
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacgacaacccaatcatcccgggctttcaccccgacccgacgatctgccgggtc
gaagataccttttacctcgcgaccagttccttcgagtacttccccggcgtcccgttgtac
cgcagccagaacctgaccgactgggaaccgatcgggcacgcactcacccgcgacgaccaa
ctgcccctggagggtgcccgctcctcgatggggatctttgcgccgacgctgcgccaccac
gacggcaccttctacatggtgaccacgaacgtcaccaacggcggtcacttcttcgtcacc
gccgacgatccggccggcgagtggtcagacccgacgtgggtcgacgcgccgggcatcgac
ccggacctcttcttcgacgacggcacctgctacttcacctaccacgccgacgaccccgac
gcacccatcaagcaggccgaactcgacctggagacgggcgaactcggcgagccctacccc
gtctgggaggggttccgcgatccctacgccgaggccccgcacgtcatcgaacgcgacggc
acctactacctgctcgtcgccgagggtggcacccacgcgggtcacatggtcgtcgcggcg
cgcgccgacgacccggccggtccctacgagggctgtcccgacaacccggttctcacgcac
tggggacgcccgcgtgacgaaatccgcgcgactggccacgccgacctcaccgtcgacgga
aacgggcagtggtggctcgtctttctgggcatccgccagcacagcatgtggccgcgcttt
caccacctcggccgcgagaccttcctcgcgcccgtctcctgggaggacggctggccggtc
gtcaacggcggcgagccggtcacgaccgagatggatgccccgctcccaggcgagccccga
gacgatgtgacgtcggtcgatcgcaccgacacgacgttcgctgacggcctcggcgtggag
tgggagttccgccgcaatcccgaccgcgagcgctacgagacggggccggacggactcacc
ctccacggcggcccggagaccctggacgaacccggggccacgttcgtcggtcgccgacag
accgccttcgactgttccgccgaagcgacgctcgccttcgatcccgacgaggacgaggag
gccggcctcgccctcgtgatgaacgaggaccaccactaccaggtcggggtgacccagcag
gacggccgccgggaagccgtcgtgcgcctccggatcggtgacgcgacagaagtggtcggc
cgcgcgccagtcggatcgacgaccgacctcgccgtcgaggctgacacgcagacgtatcgc
ttcctcgtggacggtgaagaggtggcgaccgcatcgacgcgctatctcgcgacggaggtc
gcggacggcttcaccggcgtcatgatcgggccgtacgcgaccggccgcgggcggacctgc
gagtcgaatgcagtggtcgagcggttcgtctacgaatcctga
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