Halorhabdus sp. SVX81: SVXHr_1887
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Entry
SVXHr_1887 CDS
T09281
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv00300
Lysine biosynthesis
hasv00470
D-Amino acid metabolism
hasv01100
Metabolic pathways
hasv01110
Biosynthesis of secondary metabolites
hasv01120
Microbial metabolism in diverse environments
hasv01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SVXHr_1887 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SVXHr_1887 (lysA)
Enzymes [BR:
hasv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SVXHr_1887 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WEL18049
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Position
complement(1914392..1915651)
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AA seq
419 aa
AA seq
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MSHSPPVRRLADWDHEQLLDLAAEYETPLYVLETGRVQANYRRFDAAFPDAEVMYAAKAH
TGRAVLSALLDVGADIECAARGELQRAIEAGADPNTLQYTAVNPPAADLDYAVELADEYP
GLTITGGARDTFDRLEARGYDGRVAIRINPGIGTGHHEKVATGKDAKFGIPAERVPDLAA
DLRQRFDLVGLHAHVGSGVLTGEVDEHARALGKVADLAREVGDGDLEFVDFGGGFGVPYR
EDEPPLDIEAVAETVREAVGDLDATMKFEPGRYVVADAELILTRVNTVKEAPKTTVVGVD
ASLATLIRPAMFDSYHPIRNVSAPDRADEAVSVGGPCCTSADVFATDRPIARPEREDILA
IGNAGAYGYELANNFHSQPRPAEVAIEGDGARIVRRRETMADVTRVEDETAGVPDAERE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattcgccgcccgtccgtcgcctcgccgactgggatcacgagcagttgctcgat
ctcgctgccgagtacgagaccccactgtacgtccttgagaccggacgcgtccaggcaaat
taccgccggttcgacgccgcgttcccggatgccgaggtaatgtacgccgcgaaggcacac
accggccgggctgtcctctctgcattgctcgacgtcggtgccgacatcgagtgtgctgcc
cgcggggagttacagcgggcgatcgaggccggcgctgatcccaacacgctccagtacacg
gccgtcaacccgcccgccgcggaccttgactacgctgtcgaactcgccgacgagtaccct
gggctgacgatcaccggcggcgctcgggacacgtttgaccgcctcgaagcgcgggggtac
gacggccgcgttgccatcaggatcaatcccgggatcgggaccggccatcacgagaaggtc
gcgacgggcaaggacgcgaagtttgggatcccggccgagcgcgtccccgatctcgctgcc
gatctccggcagcgattcgatctggttggtctgcacgcccacgtcggcagcggcgtcctg
acgggcgaagtcgacgagcacgcccgtgcgctcggcaaagttgcagacctcgcgcgggaa
gtcggcgacggcgacttggagttcgtcgacttcggcggcgggttcggcgtcccgtatcgc
gaggacgaaccaccgctcgacatcgaagccgtcgccgagacggtccgggaggcggtgggc
gacctcgacgcgacgatgaagttcgaacccggccggtacgtcgtcgccgacgccgagttg
atcctcacgagggtcaacacggtcaaggaagcccccaaaacgactgtcgtcggcgtcgat
gcctcactcgcgacgctgatccggccggcgatgttcgattcctaccatccgatccggaac
gtctctgcgccggatcgggcggacgaagcagtctccgtcggcggcccctgttgtaccagc
gcggacgtcttcgcgaccgaccggccgatcgctcgacccgaacgcgaggacatcctcgcg
atcggcaacgccggtgcctatggctacgaactcgcgaacaatttccactcccagccccgg
ccagccgaggtcgcgatcgagggcgacggcgcacgcattgttcgtcgccgggagacgatg
gccgacgtcacgcgagtcgaggacgagacggccggcgtgcccgatgcggagcgtgagtga
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