Halorhabdus sp. SVX81: SVXHr_1930
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Entry
SVXHr_1930 CDS
T09281
Symbol
uvrC
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SVXHr_1930 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_1930 (uvrC)
DNA repair and recombination proteins [BR:
hasv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SVXHr_1930 (uvrC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_RNaseH
UvrC_M
HHH_5
HHH
GIY-YIG
UVR
HHH_2
DUF7508
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WEL18092
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Position
complement(1946352..1948091)
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AA seq
579 aa
AA seq
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MDSAEVRSRAGDLPTEPGVYQFVDSSDEDATVLYVGKAVALRDRVRSYADPRGERIRRMV
ERAADIDVVVTDTETQALLLEANLIKRHQPRYNVRLRDDKSYPLVQLTDHPAPRIEITRD
PAEGADVFGPFTDKSDVETVVKAIRETFGLRGCSDHKYANRDRPCLDYDIGLCSAPCTGE
VSPAAYREDVAAIRRFFRGETGVLAEPIREEMDRAADEAAFERAANLRDRLDVVESFHAG
GAKAIESTEDRTTDVLAVALEGDSATVARLHSNEGSLVDRERHAVKTPDGQRAGDVLAAF
VPQYYAERELPDRLLVSDRLSDDDVQSWLSDAGVDVRVPGAGREATLVDLALKNARRGAG
RDDGVAALADVLGLDAAARIEGFDVSHTGGAGVVGSDVCFVDGSPEKPDYRRKKLAEGND
DYAAMRSLIGWRAERAIEGRDDRPDPDLLLIDGGEGQLAAAREALDAVGWDVPAVGLAKA
EERVITPERTFDWDDDTPQLRLLQRVRDEAHRFAVQYHTTLRDDVSTALDDVPGVGPELR
TRLLGRFGGVDGVRAASTTELRDVPGVGEATAKTIRRQL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggactcggccgaggttcgatcacgtgctggcgatctcccgactgagcccggcgtctat
cagttcgtagatagttcggacgaggacgccactgttctctacgtcggcaaagccgtggct
ctccgggaccgcgtccgttcgtatgccgatccccggggtgagcgcatccggcggatggtc
gagcgcgccgccgatatcgacgttgtcgtcaccgacaccgagacgcaggcgctcctcctc
gaagcgaatctcatcaaacgccaccagccacggtacaacgtccggctgcgcgacgacaag
tcctatccgctcgtgcaactgaccgatcaccccgcgccacggatcgagatcacgcgtgat
ccagccgaaggtgcagacgtctttggcccgttcaccgacaagagtgacgtcgagaccgtc
gtcaaggcgattcgggagaccttcggcctccgtggctgttcggatcacaagtacgccaat
cgcgatcgcccctgtctggactacgacatcgggctctgctcggccccgtgtaccggcgag
gttagcccggcggcctaccgcgaggacgtcgcggcaatccgccggttcttccgcggggag
actggcgtcctcgcggagccgatccgcgaggagatggaccgggccgccgacgaagcggcg
ttcgaacgagcggcgaacctccgggaccgcctcgacgtcgtcgagtccttccacgcgggt
ggcgcgaaggccatcgagtcgaccgaagaccggacgaccgacgtgctggcggtcgccctg
gagggtgactcggcgacggtcgcgcgcctccacagcaatgaggggtcgctggtcgaccgg
gagcgtcacgccgtcaagactcccgatggccagcgggccggtgacgtcctcgccgccttc
gtcccccagtactacgccgagcgggagctccccgaccgtcttctggtctccgaccgactg
agtgacgacgacgtgcaatcctggctatccgacgctggcgtcgacgttcgcgttccgggg
gccggtcgggaagcgacgctcgtcgacctggcgctgaagaacgccagacggggggcgggg
cgggacgacggcgtggccgcgctggccgacgtcctggggctcgacgccgccgcccgcatc
gaggggttcgacgtgagccataccggcggcgcgggggtcgtcggcagtgacgtctgtttc
gtcgacgggtcgcccgagaaacccgactatcgacgcaagaaactcgccgaaggcaacgac
gactacgcggccatgcggtcgctgatcggctggcgggccgagcgggccatcgaagggcgg
gacgaccggccggatcccgatctgctcctgatcgatggcggcgagggacagctcgcggcc
gctcgcgaggccctcgacgccgtcggctgggacgtccctgcggtcgggctggcgaaggcc
gaagagcgggtgatcactcccgagcggacgttcgactgggatgacgacacaccacagttg
cgcttgctccagcgcgtccgcgacgaggctcaccgctttgccgttcagtatcacacgaca
ctcagggacgacgtgtcgacggcactcgacgacgtcccgggcgtcggtcccgaacttcgg
acgcggctgctggggcggttcgggggcgtcgacggggtccgggcggcctcgacgacggaa
ctccgagacgtcccgggcgtcggtgaagcgacggcgaaaacgatccgacggcaactttaa
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