Halorhabdus sp. SVX81: SVXHr_2010
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Entry
SVXHr_2010 CDS
T09281
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hasv03000
]
SVXHr_2010
Transcription factors [BR:
hasv03000
]
Prokaryotic type
Helix-turn-helix
Other families
SVXHr_2010
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GFIT
Motif
Pfam:
TrmB
MarR_2
HTH_IclR
HTH_27
CHASE2
DUF2250
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
WEL18171
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Position
2017575..2018327
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AA seq
250 aa
AA seq
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MTEQDVLDSLETLGLSNYEAQVFLALQRLGTGTAQDVSDVSEVPRSQVYGAAEDLAEKGL
VEVVEASPKAYRSVTLATAQDILTERLERERSRAFEHLESIRTEDDERDASGDVSTLRGR
QSIDDRVVALVERAAGAVVFVAPTADSLTDDIVTALAEKAASGVSVTVVTADPALRARFP
DAVSVFVMSEDNPADFAGRALMVDDRSVLLAVETDEGPLGEEAMWTGDSRIGRILAEFMR
SGMESGRERQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaggacgtcctcgactccctggagacgctcggactgtcgaactacgaggcc
caggtgttcctcgcgttgcagcgactcggcaccgggacggcccaagacgtcagcgacgtc
tcggaggtgccgcggtcgcaggtctacggtgccgccgaggacttggccgagaaggggctg
gtcgaagtggtcgaagcctcgccgaaagcctatcgctcggtcacgctggcgaccgcccag
gacatcctcaccgagcgcctcgaacgggagcgatcgcgggcgttcgaacacctcgagtcg
atccgtacggaagacgacgaacgcgatgcgagcggggacgtctcgacgcttcggggtcgg
cagtcgatcgacgaccgcgtcgtcgccctcgtcgaacgcgcggcgggggcggtcgtcttc
gtcgcccccacggccgactccctgaccgacgatatcgtgaccgcactcgcggagaaggct
gccagcggcgtctcggtcaccgtcgtcacggccgatcccgcgctccgtgcacggttcccg
gatgccgtttccgtgttcgtcatgtccgaggacaaccccgccgacttcgccggtcgggcg
ctgatggtcgacgaccggagcgtcctgctcgccgtcgagaccgacgaggggccgctcggc
gaggaggcgatgtggaccggcgactcacgtatcggccgcatcctcgccgagttcatgcga
tccgggatggagtcgggacgcgaacggcagtag
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