Halorhabdus sp. SVX81: SVXHr_2043
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Entry
SVXHr_2043 CDS
T09281
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHr_2043 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_2043 (rpoD)
Enzymes [BR:
hasv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHr_2043 (rpoD)
Transcription machinery [BR:
hasv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHr_2043 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
TRAP_alpha
Motif
Other DBs
NCBI-ProteinID:
WEL18202
LinkDB
All DBs
Position
2048297..2049040
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AA seq
247 aa
AA seq
DB search
MAEYDVTFIERGDTEARFLVRGVTPAFANGVRRAMIADVPTFSIDTVRVIENSSVMFDEQ
IGLRLGLVPLTTPVGEFEIGDEVTLALDVEGPDTAYSGDLVANDEMVGPAEPDVPIIELK
DDQRLELEADAVLDTGREHAKHQGGVAVSYRHLQRVEPQGEREEFADDDAEIVRGVIEDD
GDLIPTAEFDHDLTNRYPDTQVEIEDVTDAFVFHVETDGSFDVDTLVKEGVGTLRRRAEE
LTETIQL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatacgacgtcacgttcatcgagcgcggggacactgaggcccggtttctcgtc
cggggagtgacacctgcgttcgcgaacggcgtccgccgggcgatgatcgctgacgtgccg
acgttcagcatcgacaccgtccgcgtcatcgagaactccagcgtgatgttcgacgagcag
atcgggctccgactcgggctggtgccgctgacgacgcccgtcggcgagttcgagatcggt
gacgaagtcacgctggcgctggacgtcgaaggcccggatacggcctattcgggcgacctg
gtggccaacgacgagatggttggaccagccgaacccgacgtcccgatcatcgaactcaag
gacgatcagcgactggaactcgaagccgatgcggtcctcgatacgggacgggaacacgcc
aaacaccagggcggcgtggccgtctcctaccggcacctccagcgcgtcgagccacaggga
gagcgcgaggagttcgccgacgacgacgcggagatcgtccgcggcgtcatcgaggacgac
ggcgacctgatcccgacggcggagttcgatcacgatctgacgaaccgataccccgacacg
caggtcgagatcgaagacgtgaccgatgccttcgtcttccacgtcgagaccgacggttca
ttcgacgtggacacgctggtaaaggagggcgtcggcacgttgcggcggcgagccgaggaa
ctgaccgaaaccatccagctataa
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