Halorhabdus sp. SVX81: SVXHr_2173
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Entry
SVXHr_2173 CDS
T09281
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hasv03000
]
SVXHr_2173
Transcription factors [BR:
hasv03000
]
Prokaryotic type
Helix-turn-helix
Other families
SVXHr_2173
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Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
HTH_IclR
HTH_24
DUF2250
MarR_2
DprA_WH
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WEL18328
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Position
complement(2193309..2194382)
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AA seq
357 aa
AA seq
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MDRDTLLSGLSDAGLSTYQADAYVTLLEQGVSPAVDIARHCSIPAPRIYDVLKELEQMGY
VETLDRETLHARACDPADLIDDLEVTSERLTAVAEEIEDRWERAPLGEHEMNVTKRAETT
IDHAEDLIREADSTVDLALTDTQLLEFEDVLTTAFENDVVVRVSVFPTAGEDPDLTDHPV
GDFVTELRRRSIRSPFLALVDRTHACLVPTTRMPDPYGIVANDDIISFIFQWYFQTCLWA
VWEPIGKRQRYPLVYVCLEEFIRDVYPLWWDGAIISVTVEGIDTDSGDERTVSGVLREVI
YSGQTMDDRQPTLAELSGQASMVLSTSAGHCSVGGWGALIEDVEARRITLRGIEWVR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacagggacacacttttatcggggctttcagacgcggggctctcgacgtaccaggcg
gatgcgtacgtcacgttgctcgaacagggggtatcgccggctgtcgacatcgccagacac
tgttcgattccggcaccacggatctacgacgtgctcaaggaactcgaacagatgggatac
gtcgagacactcgatcgggaaacgttacacgcacgcgcctgtgatccggcggatctcatc
gacgatctcgaggtgacgagcgagcgtctcacggcggtcgccgaggagatcgaggaccgc
tgggaacgggcaccgttgggcgaacacgagatgaacgtgaccaagcgggccgagacaacg
atcgatcacgccgaggacctgatccgtgaggctgactcgacagtcgaccttgcactcacg
gacacccagctcctggagttcgaagatgtgctgacgaccgccttcgagaacgacgtggtc
gtgcgtgtttcggtgtttccaaccgctggtgaggaccctgatctcaccgaccatcccgtc
ggcgatttcgtcaccgagttgcgtcgtcgttccattcggagtccgtttctggcgttggtc
gatcggacccacgcgtgtctcgttccgaccacgcggatgcccgatccgtacggcatcgtc
gccaacgacgacatcatctcgtttatcttccagtggtacttccagacgtgcctgtgggcc
gtctgggaaccgatcgggaaacgccagcggtatccactggtctacgtctgtctcgaagaa
ttcatccgtgacgtctatccgctctggtgggacggggcgattatctccgtcaccgtcgaa
gggatcgatactgactccggcgacgagcggaccgtctccggcgtcctgcgggaggtcatc
tattcgggacagacgatggacgatcgccaaccgacgctggctgaactgtccgggcaagcg
tcgatggttctctcgacgtcggctggacactgttcggtcggtgggtggggggcgctgatc
gaggacgtcgaggcccgccgcattaccttacgcggcatcgagtgggtcaggtaa
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