Halorhabdus sp. SVX81: SVXHr_2247
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Entry
SVXHr_2247 CDS
T09281
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hasv03016
]
SVXHr_2247 (truB)
Enzymes [BR:
hasv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SVXHr_2247 (truB)
Transfer RNA biogenesis [BR:
hasv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SVXHr_2247 (truB)
Prokaryotic type
SVXHr_2247 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
Pus10_C
DKCLD
PUA
Motif
Other DBs
NCBI-ProteinID:
WEL18401
LinkDB
All DBs
Position
complement(2270380..2271267)
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AA seq
295 aa
AA seq
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MTLRGPPADRSPAELLSFGVLNLDKPPGPSAHQVAAWVRDLATVERAAHAGTLDPKVTGC
LPMLLGDATRMAQVFDDSDKAYIAVLELHERLADPATLEAVADEFEGELYQKPPKKSAVV
RRLRSRKIHSLDVLEAEDRRALISIRCESGTYIRKLCHDMGMALGTGAHMGDLRRMATDP
FDDSDLVTMHDFVDALAWWREDDDPDPLREVVQPAERALVDLPSVTIAPSAAESVAEGAP
VYAPGVIDADDDLDPAAEPLVACYIPNGAAVCLGTLAGDPDADEGTVVELERVLV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacactccgagggccacccgcggaccgatcgccggccgaactcctatctttcggcgtg
ttgaacctcgataagccccccggtccttctgcccaccaggtcgccgcctgggtgcgcgat
cttgcgaccgtcgagcgggcggcccacgccgggacgctcgacccgaaggtcaccggctgt
ctcccgatgttgctcggcgacgccacccgcatggcccaggtcttcgacgatagcgacaag
gcgtacatcgccgtgctcgaactccacgaacgactggccgaccccgccaccctcgaagcc
gtcgccgacgagttcgagggcgaactctaccagaaaccgccgaagaaaagcgccgtcgtc
cgtcggctgcgctcccggaagatccatagcctggacgtcctcgaagccgaggatcgccgc
gcactcatctcgatccggtgtgagagtggcacctacatccggaaactctgtcacgacatg
gggatggcgctgggcaccggcgcgcacatgggcgatctccgccggatggcgaccgatccc
ttcgacgatagcgatctggtgacgatgcacgacttcgtcgacgccctggcgtggtggcgc
gaggacgacgaccccgacccactacgggaggtggtccagcccgccgaacgcgcactggtt
gatctcccgtcggtcacgattgccccgagtgccgcggaatccgtggcggagggtgccccc
gtctacgccccgggcgtcatcgacgccgacgacgacctcgatcccgccgccgaaccgctc
gtcgcctgctacattcccaacggcgctgcggtgtgtctggggaccctcgcgggggacccg
gacgccgacgaggggaccgtcgtcgaactggaacgcgtgctcgtctaa
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