Halorhabdus sp. SVX81: SVXHr_2390
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Entry
SVXHr_2390 CDS
T09281
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hasv03016
]
SVXHr_2390 (rnz)
Enzymes [BR:
hasv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SVXHr_2390 (rnz)
Transfer RNA biogenesis [BR:
hasv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SVXHr_2390 (rnz)
Prokaryotic type
SVXHr_2390 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Bac_luciferase
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WEL18540
LinkDB
All DBs
Position
2400543..2401475
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AA seq
310 aa
AA seq
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MRVTFLGTSGAVPTTERNPSGVMVRREGERLLFDCGEGTQRQMMHFGTGFDVAHIFVSHM
HGDHVLGIPGLLQTMDFNDREDPLAIHAPHGTRSRLEELISATGDRPSYPLRITQNGPGD
VVLDAEGYEVRTIETEHRTQSLGFALVEDDRTGRFDRETAENELGIEPGPKYSKLHAGEP
VEHDGRTIQPEEVVGPPRPGRTVVYSGDTRPVEAVRRASEDADLLIHDATFADDRAERAR
GTGHSTAREAGSLAAEAGAKRLALTHISTRYAGQADRLEAEAREAFGDAAFVASDGQAVD
VPYPDDTRDE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgacgtttctcgggacgagcggcgcggtgccgacgaccgaacgcaacccttcg
ggagtgatggtccgccgggagggcgagcgactgctctttgactgcggcgaggggacccag
cgccagatgatgcatttcgggacgggcttcgacgttgcgcacatcttcgtctcgcacatg
cacggcgatcacgtgctgggcatccccggcttgttgcagacgatggacttcaacgaccgc
gaggacccgctggcgatccacgcgccacacgggacccggtctcggctggaggagcttatc
tcggcgaccggcgatcggccgtcctatcccctccgaattacccagaacggcccaggtgac
gtggtgctcgacgccgagggctacgaggtccgcacgatcgagaccgaacaccggacccag
tcgctcggcttcgcactggtcgaagacgaccggacgggacgtttcgaccgggaaacggcc
gagaacgaactcgggatcgagcccggaccgaagtactcgaaactccacgcgggggagcca
gtcgaacacgacgggcgaacgatccagcccgaggaggtcgtcggcccgccgcggccgggt
cggacggtcgtctacagcggcgatactcgccccgtcgaggcggtccgccgagccagcgag
gacgccgacctgttgatccacgacgcgaccttcgccgacgaccgggccgagcgcgcccgg
gggaccggccactcgacggcgcgggaagccggatcgctggcagccgaagccggcgcgaag
cgactcgcgctgacgcacatctcgacgcgatacgccggacaggccgaccgactcgaagcg
gaggcccgcgaggcgttcggcgacgccgccttcgtcgcaagtgacggccaggcggtcgat
gtcccgtacccggatgacacacgagacgagtga
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