Halorhabdus sp. SVX81: SVXHr_2492
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Entry
SVXHr_2492 CDS
T09281
Symbol
dppF4
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transportsystem, ATPase component
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SVXHr_2492 (dppF4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hasv02000
]
SVXHr_2492 (dppF4)
Transporters [BR:
hasv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SVXHr_2492 (dppF4)
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GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
ATP-synt_ab
RsgA_GTPase
AAA_16
AAA_29
AAA_18
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WEL18639
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Position
complement(2499666..2500973)
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AA seq
435 aa
AA seq
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MAETGETLIEVENLKKHYGGGGVFANPSVKAVDGVSFSIKRGETLGLVGESGCGKSTLGR
TLVRLEEATEGTISFDGTDITTLSGEDLKDWRRNAQMVFQDPESSLNDRMTVGEIIREPL
DAHDWRTKQERQKRVLDLLTSVGLREEHYYRYPHQFSGGQRQRVGIARALALEPEFLVLD
EPVSALDVSVQAKIITLLEDLQEEFDLTYLFIAHDLSVVRHICDRVAVMYLGKIMELSDT
EAVYENAHNPYTRSLLSAIPRPDPSRSSHRITLPGTPPSPRDPPTGCQFSTRCPAKIRPE
GYEDVDEAVWDAIERFREVVRERSRMNLGAVDRLRRQLGNFSAYDDIDETVTDLFGDLEV
PADVREQIETAAELVKDGRPAEARSHLGEVFNGVCDLQRPAFHPVGENNHMSYCHRHDAE
YEDVDPVLDHRTRDA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagaccggcgagacgctgatcgaggtcgagaacttaaagaagcactacggcggt
ggcggcgtcttcgccaatccgtcggtaaaggccgtcgacggcgtgagcttctcgatcaaa
cgtggggagacgctcggcctcgtcggcgagtccgggtgtgggaagagtacgctcggccgg
acgctcgtccgcctggaggaggcgaccgaagggacgatctccttcgacgggaccgacatc
acgacgctgtcgggcgaggacctgaaagactggcgtcgcaacgcccagatggtcttccag
gaccccgagtccagcctcaacgatcggatgaccgtcggggagatcatccgcgagccgctg
gacgcccacgactggcggaccaaacaggagcgccagaagcgcgtgctggacctgttgacg
tcggtggggctccgggaggagcactactatcgctatccccaccagttctcgggcggccag
cgccagcgggtcggcatcgcgcgggcgctcgctctcgagccggagtttctcgtcctcgac
gagccggtcagcgcgctggatgtctccgtccaggcgaagatcatcacgctgctcgaggac
ctccaagaggagttcgacctcacgtacctctttatcgcccacgacctctcggtcgtgcgg
cacatctgtgatcgcgttgcggtcatgtaccttgggaagatcatggagctcagcgacacc
gaggcggtctacgagaacgcccacaacccctacacgcggtcgctcctctccgccattccc
cggcccgacccctcgaggtcctctcaccggatcacgctgccgggaacgccacccagcccg
cgggatccgccgacaggctgtcagttctcgacccggtgtccggccaagatccggccggag
ggctacgaggacgtcgacgaggcggtctgggacgcgatcgagcgcttccgggaggtcgtc
cgcgaacgatctcggatgaatctcggggcagtcgaccggctcagacgacagctcggtaac
ttctcggcgtacgacgacatcgacgagacagtcacggacctctttggcgacctcgaggtc
cccgcggacgttcgcgaacagatcgagaccgccgccgagttggtcaaggacgggcggccc
gcggaggcacggagtcacctcggagaagtattcaacggcgtctgtgacctccagcggccg
gcgtttcacccggtcggggagaacaaccatatgagctactgccaccgtcacgacgccgaa
tacgaggacgtcgacccagtcctcgaccaccgaacccgtgacgcctag
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