Halorhabdus sp. SVX81: SVXHr_2493
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Entry
SVXHr_2493 CDS
T09281
Symbol
dppD3
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transportsystem, ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SVXHr_2493 (dppD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hasv02000
]
SVXHr_2493 (dppD3)
Transporters [BR:
hasv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SVXHr_2493 (dppD3)
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
DUF87
Sigma54_activat
NACHT
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WEL18640
LinkDB
All DBs
Position
complement(2501000..2502094)
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AA seq
364 aa
AA seq
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MSRERTAESARGEGDPLLSVRNLQTVFHTDRETIRAIDDVSFDVYPGETVGIVGESGSGK
SVTARSIMGLIDSPGEVLPESSINFNGQELTALSDAAYREVRGSGIGMVFQDPQQSLNPV
YTIGNQIREALEINRGITGAEATAEATDLLESVGIPDAKRRLDEYPHEFSGGMRQRAVIA
MMLACEPDLLIADEPTTALDVTIQAQILDLLKEIQAERNLAILFITHDMGVIADISDRVN
VMYAGEIVEKASVENLFERPKHPYTRALIESIPGEHSREEGLNTIEGEVPTPNAPADHCR
FAPRCPQAFGACDEMAPQHIDVGETIEHTASCLLYPEGKTEAERLEHHSALASGEDIETE
GEHR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtgaacgcaccgccgagagcgcacgcggcgagggcgacccgctactctcggtc
cggaacctccagacggtcttccataccgaccgggagacgatccgagcgatcgacgatgtg
agtttcgacgtctaccccggcgagacggtcggtatcgtcggcgaatcgggatcaggcaaa
agcgtcaccgcccgctcgatcatgggactaatcgactcccctggcgaggtactcccggag
tcgtcgatcaacttcaacggccaggagctgaccgccctctccgacgccgcctatcgcgag
gtccgagggagcggtatcggcatggtgtttcaggacccccaacagtcgctgaaccccgtc
tacacgatcggcaatcagatcagggaagccctagagatcaaccggggtatcacgggcgcg
gaagcgaccgcggaggcgaccgacctgctcgaatcggtcggtatccccgacgcgaagcgt
cgcctcgatgagtacccccacgagttctccggcgggatgcgtcagcgcgccgtcatcgcg
atgatgctagcctgtgaacccgacctgctgatcgccgacgagccgacgaccgccctggac
gtgaccatccaggcgcagatcctggatttgctgaaagagatccaggcggaacgcaacctc
gcgatcctttttatcacccacgacatgggcgtcatcgccgatatctccgatcgcgtgaac
gtgatgtacgcgggcgagatcgtcgagaaggcgtcggtcgagaacctcttcgagcgcccg
aaacacccctatacgcgggcgctgatcgaatcgatccccggcgagcactcccgcgaagag
gggctcaacacgatcgagggagaggtgccaacgcccaacgcgccggcggaccactgtcgg
ttcgccccgcgatgtccgcaggcgttcggggcctgcgacgagatggccccccagcacatc
gacgtcggcgagacaatcgaacacacggcgtcgtgtctgctgtacccggaagggaagacg
gaggcggaacggctcgaacaccacagcgcacttgcgagcggtgaagacatcgaaacggaa
ggtgagcaccgatga
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