Halorhabdus sp. SVX81: SVXHr_2567
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Entry
SVXHr_2567 CDS
T09281
Symbol
holB2
Name
(GenBank) ATPase involved in DNA replication HolB, small subunit
KO
K04801
replication factor C small subunit
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SVXHr_2567 (holB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hasv03032
]
SVXHr_2567 (holB2)
DNA replication proteins [BR:
hasv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
SVXHr_2567 (holB2)
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Paralog
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GFIT
Motif
Pfam:
Rep_fac_C
DNA_pol3_delta2
AAA_16
AAA_22
AAA
AAA_24
Sigma54_activat
RCF1-5-like_lid
NACHT
AAA_30
AAA_14
AAA_33
SLFN-g3_helicase
Viral_helicase1
AAA_assoc_2
Zeta_toxin
TniB
AAA_2
FtsK_SpoIIIE
TsaE
AAA_11
7TMR-HDED
ATPase_2
DNAX_ATPase_lid
nSTAND3
AAA_18
HEAT_2
ResIII
Rad17
AAA_6
Motif
Other DBs
NCBI-ProteinID:
WEL18712
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All DBs
Position
complement(2579833..2580843)
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AA seq
336 aa
AA seq
DB search
MDGPLWTERHAPTIDELPQPEVRDQLRGALDDPMNLLVHGPAGAGKTAAVRAFAREAHAD
VEADLVVINVADFFDLTKKELAEDPRFERFITPKRRRESSKADLINHVLKEAASYTPVSG
SYKTILLDNAERMREDFQQALRRVMEQYYEATQFAIATRQSSTLIPPIRSRCFPVTVRAP
THDETEAVLRRIVEAEDADYDDEGLEYVAGYAGGDLRKAILGAQTTYEEAGEITMNAAYE
ALGEVRTDEAVETMLSAAEAGDVTDARSTLDDLLVDEGHSGVEVLEVLLRVGRSRYSGDR
LARLHRVAGEIDLDLAEGTDDRLHLSHLLAELAAEA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggacgggccgctgtggaccgagcgacacgcgccgacgatcgacgagttgccacagccc
gaagtacgtgaccagctccggggggcactcgacgatccgatgaacctgctggttcacggc
cccgccggcgctggcaagaccgccgcagtccgggcgttcgcccgtgaggcccacgccgac
gtcgaggccgatctggtcgtgatcaacgtcgcggacttcttcgatctgaccaagaaagaa
ctcgccgaggacccccgattcgagcggtttatcacgcccaaacgccgccgggaatcctcg
aaggccgacctgatcaatcacgttctcaaggaggccgcgagttacacgccggtttcgggg
tcgtacaagacgatcctgctggacaacgccgagcggatgcgcgaggacttccagcaggcg
ctgcggcgggtcatggagcagtactacgaggcgacgcagttcgccatcgccacccgccaa
tcctcgacgctgatcccgccgatccggtcacggtgtttccccgtgacggtccgcgcgccg
acccacgacgagaccgaggccgtcctccgccggatcgtcgaggccgaggacgccgactac
gacgacgaggggctggaatacgtcgcagggtacgccggcggcgaccttcggaaagcgatc
ctgggtgcccagaccacctacgaggaggcgggcgagatcaccatgaacgcggcctacgag
gcgctgggcgaggtccggactgacgaggccgtcgagacgatgctttccgccgccgaagcg
ggcgacgtgaccgacgcacggtcgacgctcgacgacttgctcgtcgacgagggtcacagc
ggcgtcgaggtgctggaggtactcctccgggtcggtcgctcgcggtactccggtgatcgg
ctggcacggctgcatcgggtagccggagagatcgacctcgacctcgcggaagggaccgac
gaccggttgcacctctcgcatttgctcgccgaactggccgccgaagcgtga
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