Halorhabdus sp. SVX81: SVXHr_2824
Help
Entry
SVXHr_2824 CDS
T09281
Symbol
endA
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hasv03016
]
SVXHr_2824 (endA)
Enzymes [BR:
hasv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SVXHr_2824 (endA)
Transfer RNA biogenesis [BR:
hasv03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SVXHr_2824 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Peptidase_S32
Motif
Other DBs
NCBI-ProteinID:
WEL18961
LinkDB
All DBs
Position
complement(2848112..2849158)
Genome browser
AA seq
348 aa
AA seq
DB search
MELVREGDVVRGGSEARERFYDSHGYGHVEAGGLVLAPVEAAHLLYRGDVEHVRDATTGD
ALDFRTLVSSAAVSEIDVLVYKDLRDRGFYLSPAREGWVDDPAGADFVVYPRGQGPWDDD
VAYRIRAISERTAVSAATLGDSVLAVVDEESAITYLETGHPEIGGSTTVDLSTGVAADLL
GDRVLVWDPPEALYHEGFYGQPLDDETGEPLQLSLIEAAALARQGVLDVEGGADAIIECG
REVEGERFDRRLAVYRALRERGVVPKTGYKFGADFRTYADVETVDSLGHSELLVRVLPAD
HAFTPRDLALDVRLAHGVRKRMVFALVAEADADGDPRIEWLEVGRLTP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaactggtccgtgagggagacgtggtccgcgggggtagcgaggctcgcgagcgcttc
tatgactcccatgggtacggtcatgtcgaggctggcgggctggtgttggcaccggtcgag
gccgcccatcttctctaccggggtgacgtcgaacacgtccgggatgccacaaccggcgac
gcgttggacttccggacgctcgtttcctcggccgccgtctcggagatcgacgttctcgtc
tacaaggacctccgggatcgggggttctacctctcgcccgcccgcgagggctgggtcgac
gatccggcaggggccgacttcgtggtctacccccgtgggcaggggccctgggacgacgat
gtcgcctatcggatccgggcaataagtgagcggacggccgtctccgcggccacgctgggg
gatagcgtcctggcagtcgtcgacgaggagtcggcgatcacctatctcgaaacgggccac
cccgagatcggcggctcgacgacggtcgacctgtcgaccggggtcgcggccgacctgctg
ggcgaccgagtcctggtctgggacccgccagaagcactctaccacgaggggttctacggc
caaccgctcgacgacgagacgggcgagcccctccagctctcgctgatcgaggccgccgcg
ttggcccgccaaggcgtgctcgacgttgagggcggtgcggacgcgatcatcgagtgcggt
cgcgaggtcgagggcgagcgcttcgaccgtcgactcgcggtctatcgggcactccgcgag
cgtggcgtcgtgcccaagacgggctacaagttcggcgctgatttccggacgtacgccgac
gtcgagaccgtcgactcgctgggccactccgagttgctcgtgcgggtgttaccggcggat
cacgctttcacgccgcgcgatctcgcgcttgacgtccgactggcccacggcgttcgcaag
cggatggtgttcgcgctggtggcggaggctgacgcggacggcgacccccgaatcgagtgg
ctcgaagtcgggcgactgacgccgtga
DBGET
integrated database retrieval system
