Halorhabdus sp. SVX81: SVXHr_2825
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Entry
SVXHr_2825 CDS
T09281
Symbol
topA2
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hasv03032
]
SVXHr_2825 (topA2)
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_2825 (topA2)
Enzymes [BR:
hasv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SVXHr_2825 (topA2)
DNA replication proteins [BR:
hasv03032
]
Prokaryotic type
DNA Topoisomerases
SVXHr_2825 (topA2)
DNA repair and recombination proteins [BR:
hasv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SVXHr_2825 (topA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Zn_ribbon_Top1
Auto_anti-p27
HMBD
zf_Rg
zf-C3H1
Motif
Other DBs
NCBI-ProteinID:
WEL18962
LinkDB
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Position
complement(2849242..2849997)
Genome browser
AA seq
251 aa
AA seq
DB search
MHDGIHVVAGECTTTFDGSRVREHEQRGQVLVVVKPDNTVLVHDAEGYQPVAWLTRAETV
TIDGTHLAATDGDQRLTVEIHDETASGRYPASAAGSPVGECPDCGAALVRVTDAVACTGC
DARHGLPGDAEVIDDHCECGLPKMRVERGRAFEVCVDRDCESMDDAVAEVFDREWDCPNC
EGDLRVLRRGGLLAGCEHYPECDTGFAFPAGVVVGECTCGLPLFETAGGRRCLDATCEAW
RDGSGGVPAEP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatggcattcacgtcgtcgccggggagtgtacgactacgttcgacggttctcgc
gtccgcgagcacgaacagcgcgggcaggtcctggtcgtcgtcaagcccgacaacaccgtt
ctggtccacgacgccgagggctaccagccggtcgcgtggctcacgcgcgccgagacggtg
accatcgacggcacccacctcgcggcgaccgacggcgaccagcgcctcaccgtcgagatc
cacgacgagacggcgagcggtcgctaccctgccagcgccgcgggctcccccgtcggcgag
tgtcctgactgcggagcggccctcgtccgggttaccgacgccgtcgcctgcacgggttgt
gacgcccgccatggactccccggcgacgccgaagtcatcgacgatcactgcgagtgtggc
cttccgaaaatgcgagtcgaacgcggtcgagcattcgaagtctgtgtcgaccgcgactgc
gaatcgatggacgacgccgtcgccgaggtcttcgaccgcgagtgggactgtccgaactgt
gagggcgatctccgggttctccgtcgcggcggcttgctcgcaggttgtgagcattatccc
gagtgtgacaccggctttgcgttccccgccggcgtcgtggtcggcgagtgtacctgtggc
cttccgctgttcgagaccgccggcgggcggcggtgtctggacgcgacctgtgaggcctgg
cgggacggttcgggcggcgttccggcggaaccctga
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integrated database retrieval system
