Falsihalocynthiibacter arcticus: RC74_05860
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Entry
RC74_05860 CDS
T04275
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hat
Falsihalocynthiibacter arcticus
Pathway
hat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC74_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hat03021
]
RC74_05860
03019 Messenger RNA biogenesis [BR:
hat03019
]
RC74_05860
Transcription machinery [BR:
hat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RC74_05860
Messenger RNA biogenesis [BR:
hat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RC74_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
S1CSD-TOTE-2
ATPase_2
OB_RNB
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
AML50868
UniProt:
A0A126UXR9
LinkDB
All DBs
Position
1182090..1183361
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AA seq
423 aa
AA seq
DB search
MTENTLNLSELKALKPKDLLSMAEELEIENASTMRKGEIMFHILRERADDDWEVSGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYLSPEMIRSFSMRTGDTVNGVVKAPGDTERYFAMTK
VTSINFQEPERNRHKINFDNLTPLYPDERLIMETDDPTTKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIASSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVNKIDLQKTFVLRRILNPMGTTDAIEFLISKLKQTKTNSDFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaacacccttaatctttctgaacttaaggcgcttaagcccaaagacctgttg
tctatggcggaagagcttgagatcgaaaacgcctctactatgcgcaagggcgagattatg
ttccacattctgcgcgaacgtgcggatgatgattgggaagtgtcgggcgacggcgttctt
gaggttttgcaggacggattcggatttttgcgcagcccagaggcaaactatttgcccggc
cctgatgatatttacctttcacccgagatgatccgctcgttttccatgcgcaccggcgac
acggtaaatggtgttgtgaaggctcccggcgacacagagcgttattttgcgatgacaaaa
gtgacgtcaatcaatttccaagagcctgaacgcaatcgtcacaaaatcaactttgataac
ctgacgccgctctatcctgatgagcggttgatcatggaaaccgacgatccaaccacaaaa
gaccgctctgcgcggatcattgatttggttgcgccgattggtaaaggtcaacgttcgttg
attgttgcgccgccacggaccggtaaaacggttttgttgcagaatattgcgtctagcatc
gagaaaaaccatcctgagtgttatttgatcgttttgctgatcgatgagcgcccagaagag
gtgactgatatgcagcgtagcgtgaaaggcgaggttgtttcctcaacttttgatgagcct
gcaacccgccacgtcgccgtttccgaaatggttatcgaaaaagccaaacgccttgtagag
cataaacgcgatgttgtgatcctgctggattccatcacccgccttggtcgcgcctttaac
acggttgtgccgtcctctggtaaagttctgaccggtggtgtcgacgcgaacgccttgcag
cgccctaagcgcttctttggggccgcacgtaacatcgaggagggtggaagcctgaccatt
atcgcgactgctttgatcgacacgggttcgcgtatggacgaagtcatctttgaagaattc
aaaggcacgggtaacagcgagatcgttctcgatcgcaaagtggccgataaacgcgtcttc
ccagcaatggatattctgaagtccggtactcgcaaagaggaacttctggtgaataaaatc
gatctccagaaaacctttgttctgcgtcgtattctgaatccaatgggcacaaccgatgcc
attgaattcctgatttccaagttgaaacagaccaaaacaaactccgatttctttgattcg
atgaatacctga
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