Falsihalocynthiibacter arcticus: RC74_14310
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Entry
RC74_14310 CDS
T04275
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hat
Falsihalocynthiibacter arcticus
Pathway
hat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC74_14310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hat03019
]
RC74_14310
Enzymes [BR:
hat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RC74_14310
Messenger RNA biogenesis [BR:
hat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RC74_14310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
Maf_flag10_N
Motif
Other DBs
NCBI-ProteinID:
AML52289
UniProt:
A0A126V3M7
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All DBs
Position
complement(2899217..2900635)
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AA seq
472 aa
AA seq
DB search
MDFDMLGLAPRLVQKLDELGIKTPTPIQSQAIPHAMNGRDVMGLAQTGTGKTAAFGLPLI
HALTKTGVKPAPKHAAGLILAPTRELAKQIADNLSAFTKGSHIKVGLVVGGVSINRQIEM
MTRGLDLLIATPGRLIDLIDRRAVNLSTTHYLVLDEADQMLDLGFIHALRRIAPLLPKER
QTMLFSATMPKQMNELARAYLDNPVRVEVSRPGQTADKVTQSVHYVAQSAKQSLLVELLG
THKEELSLVFMRTKHSAEKLMKSLCAAGFTAGSIHGNKSQGQRDRAIKEFKEGKITVLVA
TDVAARGIDIQGVGYVYNYDLPNVSENYVHRIGRTARAGASGQAVAFCSSAEMGELRGIE
KVTGSPLPIASGRAWENETPAKKPGGGGGRGFGGGGRRAGGGGAGGGAGGAGGGGGAGGA
GGGQRRSNGGGGNGGGQGRPNGGGGAGGKPRRSGGGGAGAGAGGQRRSRVSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacatgctgggccttgccccccgtctcgtacaaaaactagacgagctgggc
attaaaaccccaactccaattcaatcccaagccatcccgcacgccatgaatggccgcgac
gtgatgggccttgcccaaaccggtactggcaaaacggcggccttcggtctgcccctcatc
cacgccttgactaaaacaggcgttaaacctgcgccgaaacatgccgctggccttatcctt
gcgccaacgcgtgaattggccaagcaaatcgccgacaacctcagcgcctttaccaaaggc
agccacattaaagttggtctcgttgtgggcggtgtttccatcaaccgtcaaatcgaaatg
atgacccgtggccttgatcttttgatcgccactccgggccgtttgatcgacctcatcgac
cgtcgcgccgtaaacctgagcaccacacattaccttgtgcttgatgaggccgaccagatg
ctggaccttggctttatccacgcgctgcgccgcattgcgcccctcttgccaaaagagcgt
cagacaatgttgttctcggccacgatgccaaaacaaatgaacgaacttgcgcgcgcctat
ttggacaaccccgtacgcgtagaagtttcgcgtcccggtcaaaccgccgacaaagtcacg
caatcggtgcattatgtcgcccaaagcgcgaaacaaagcttgctggttgagcttctcggc
actcacaaagaagagctttcgctggtctttatgcgcacaaaacacagcgccgaaaaactg
atgaaaagcctgtgtgctgctgggtttaccgccggttccatccacggcaacaaaagccaa
ggccaacgtgaccgtgcgatcaaagaattcaaagagggcaaaatcacagtgctcgttgcg
accgatgttgccgcacgtgggatcgacatccaaggcgtaggctatgtctataactacgac
ctgcccaatgtttcagaaaactatgtgcaccgtattggccgcacggcccgtgctggtgcc
tccggtcaagccgttgccttctgctcctctgcggaaatgggcgaattgcgcggcatcgaa
aaagtaaccggaagcccgcttccaatcgcgagtggccgtgcatgggaaaatgaaacccct
gccaaaaaaccaggtggcggcggtggccgtggatttggtggcggtggtcgtcgcgcaggc
ggcggcggtgccggaggcggcgctggtggtgctggtggcggaggcggcgctggtggtgct
ggtggcggccaacgtcgctccaatggtggcggcggaaacggtggcggccaagggcggcca
aatggcggcggcggtgccggtggcaaaccacgtcgcagtggcggcggcggtgctggcgca
ggtgcaggcggccaacgtcgctcccgcgtttcttcctaa
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