Falsihalocynthiibacter arcticus: RC74_18250
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Entry
RC74_18250 CDS
T04275
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
hat
Falsihalocynthiibacter arcticus
Pathway
hat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC74_18250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hat03019
]
RC74_18250
03009 Ribosome biogenesis [BR:
hat03009
]
RC74_18250
Enzymes [BR:
hat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RC74_18250
Messenger RNA biogenesis [BR:
hat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RC74_18250
Ribosome biogenesis [BR:
hat03009
]
Prokaryotic type
rRNA processing factors
RC74_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AML52940
UniProt:
A0A126V3S1
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All DBs
Position
complement(3723876..3726758)
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AA seq
960 aa
AA seq
DB search
MAKKMLIDATHAEETRVVVVDGTKVEEFDFEAENRRQLAGNIYLAKVTRVEPSLQAAFID
YGGNRHGFLAFSEIHPDYYQIPIADREALLAEEAAYAKSLQDDDEQPDPKRRRRRRSGKA
AEAKSGDAVETKEITEDTPKKESDGPSSMDVVDFGEDDDSQNADAFEGSSPMELVAETPV
DTPAADEPEDEDTSPAVKTDASDEDDSDDGDDDDAPLQATDKDDSIESVADEDVQDEVRA
PRKFRPRKYKIQEVIKVRQILLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGI
SRKITNIADRKKLKQIAQEIDVPEGAGLIVRTAGAERTKPEIKRDYEYLQRLWEQIRSLT
LKSIAPAKIYEEGDLVKRTIRDLYNSEIDEVLVEGEAGYRVAKDFMKMIMPSHAKNVKRY
TDPLPLFARFQVETYLAGMFNPTVQLKSGGYIVIDVTEALVAVDVNSGRATKEGSIEDTA
TKTNLEAAEEVARQVRLRDLAGLIVIDFIDMEDRRNNAAVEKRMKDKLKTDRARIQVGRI
SGFGLMEMSRQRLRPGMLEATTQPCHHCHGTGLIRSDDNLALAILRQLEEEGVRRRAREV
LLKAPVGIMNFLVNNKREHIAQIEARYGLSVRIEADPFLVSPDFSIERFKTATRNLRPVE
TAVVSADASLMDDLDEEIEALEVEEEVVVAPVVAEAPSDGPSLNEDGTPKKRRRRRRRRR
GGNGGDASNSEGNNHAPQDASSDGENTAPTVDATSGADSEAPSVNSQEQVAEVSEEASGK
RRRAPRRKKSDAVAEGTNETAIGDVAASETSPEVEPGGSQSDSIDTTVKKPVRKRAPRKK
PVVEALADANHAEESSDNVAPVTEPPSETVQEVEKPKTPRKRAPRKPKVAAGEESTAEVA
EVTSAPKPPRKRAKAVPKAKKDTIVEGVSEPVVEATSESAVLAENVPAKPKKLGWWSAGK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaatgcttatcgacgccacccatgcagaggaaactcgcgttgtggtggtt
gacggaaccaaagttgaggaatttgactttgaggccgaaaacagacgccagctagctggc
aatatatatcttgcaaaagtaacgcgggttgaaccgtcgcttcaggcggcgtttattgat
tatggcggaaaccgccatggtttcctcgctttctccgagattcatccggattactatcaa
atccccatagccgatcgcgaagcgcttttggccgaggaagctgcctatgctaagtcgctt
caggacgatgacgagcaacccgacccaaaacgtcgccgtcgtcgccggagcggaaaagcc
gccgaagccaagtcgggcgacgcagttgagactaaagaaatcacagaagacacgccgaaa
aaagaatccgacgggccatctagcatggacgtcgtcgattttggcgaagacgacgacagc
caaaacgccgatgcgtttgaaggcagctctccgatggaattggtggccgaaacaccggtc
gatacacccgcggcagacgaacccgaagatgaagacacttcgccagctgtaaaaacagac
gcctccgacgaggatgactcggatgatggtgacgacgacgacgcgcctttgcaagcgacc
gacaaagacgatagtatcgagtctgttgcagatgaagatgtgcaagacgaagtgcgcgct
ccgcgtaaattccgtccacggaaatataaaattcaagaagtgattaaagttcgccaaatt
cttttggttcaagtcgtgaaagaagagcgtggcaacaaaggcgccgcacttacaacatac
ttgtctttagctggtcgctactgcgtcttgatgccgaacaccgcacgcggtggtggcatt
tctcgcaaaatcacaaatatcgctgatcgcaaaaagctcaaacaaatcgcgcaagagatc
gacgttccagaaggggcagggctcattgtgcgtacggccggggccgaacggaccaagcca
gaaatcaagcgtgactatgaataccttcaacgtttgtgggagcaaattcgctctctaacg
cttaaatccatcgctccagccaagatctatgaagagggtgatctcgtcaaacggacgatc
cgcgacctttataacagcgaaatcgatgaggttttggtcgaaggcgaagcgggctatcgc
gtggccaaggacttcatgaaaatgatcatgccgtcccatgcgaaaaacgtaaaacgctac
accgatccgttgcccttgttcgcgcgtttccaagtcgagacctatctcgcgggaatgttt
aatccgacagtgcagctgaaatcgggtgggtacatcgttatcgatgtgaccgaagcactt
gttgctgtggacgtgaactctggtcgtgccacaaaagaaggctcaatcgaggatacggcc
accaagaccaaccttgaagccgcagaagaagtggcgcgtcaagtacgcttgcgcgatcta
gctggcttgatcgtcatcgacttcattgacatggaagatcgccgcaacaatgcagccgtt
gaaaaacggatgaaagacaaattgaaaaccgatcgcgctcgtattcaagtgggacggatt
tctggtttcggccttatggaaatgtcgcgccagcgcttgcgtccggggatgctcgaagca
accacacaaccttgtcaccattgtcacggcacgggcctgatccgctccgacgacaatctc
gcgctcgcgattctacgacagctcgaggaagagggtgtccgccgtcgggcgcgcgaagta
ctgctcaaagcgccagtgggtatcatgaatttcctcgtgaataataagcgcgagcatatc
gcgcagattgaagcacggtatggtctgtctgtgcgcatcgaagctgaccctttccttgtc
agcccagatttcagcattgaacgtttcaaaactgctacgcgcaatttgcgtcctgttgaa
accgcagttgtctctgctgatgcttcgttgatggatgatttagacgaagaaattgaagcg
ctggaggtcgaagaagaagttgttgtggcaccggttgtcgcggaagctccgagtgacgga
ccatccctaaacgaagacggaacccccaagaaacgccgtcgccgccgtcgtcgtcggaga
ggtggaaatggtggcgatgcctccaattccgaaggcaacaatcatgccccgcaagacgca
agttcggatggcgaaaatacagcgccgactgtggatgcaacttctggcgcggattcggaa
gcaccgtcggtcaactctcaggagcaggtggccgaggttagcgaagaagcttcaggaaag
cgtcgccgtgccccgcgtcggaagaaatctgatgcggtggctgagggaacgaatgaaacg
gctataggcgacgtcgcagcttcggaaacatctccagaagttgaaccaggtggttcacaa
agtgactcaattgatacgaccgtcaaaaaaccggtgcgaaaacgtgcgccgcgtaaaaaa
cctgtggtcgaagcacttgccgatgccaatcatgccgaagaaagcagtgacaatgttgca
cctgtgaccgaacctccttcggaaacagtgcaagaggttgaaaaacccaaaacacctcgc
aaacgcgcgccgcgaaaaccaaaagttgcggctggcgaggagagtactgcggaagtggcg
gaggtgacttccgcgcctaaaccgccgcgtaagcgcgcgaaagcggttccgaaagctaag
aaagatacgattgttgaaggcgtgtccgaaccagtagttgaagcaacaagtgagagtgct
gttcttgcagaaaacgttccagccaaacctaagaaattgggttggtggtcagccggtaaa
tag
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