Falsihalocynthiibacter arcticus: RC74_19805
Help
Entry
RC74_19805 CDS
T04275
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hat
Falsihalocynthiibacter arcticus
Pathway
hat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC74_19805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hat03019
]
RC74_19805
Messenger RNA biogenesis [BR:
hat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RC74_19805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AML53199
UniProt:
A0A126V668
LinkDB
All DBs
Position
complement(4027418..4029094)
Genome browser
AA seq
558 aa
AA seq
DB search
MSRDRLIYLPLGGAGEIGMNAYVYGYGPKGRERLILVDLGVTFPDMDSTPGVDLIMPDIT
WLEKNKDRLEAVFITHAHEDHIGGIAHMWRKLGAPVVYARVFTAHHARRKMEEQGADPSA
VNTVPVYPAVTEAGPFKVSFFPVAHSIPESSGLVIDTPAGRIVHTGDFKLDETPVLGEAF
DPKLWAEIAKPGVKALVCDSTNVFSVKAGRSEATVGPEIERLIGESAGMVVATTFASNVA
RLKTLALAGQRSGRSVVLLGRAMRRMVQAGMETGLLKDFPTVIPVEEAREIPRNNLLLLA
TGSQGERRAAVAQLSRGKYLGMSMKEGDTLLFSSKTIPGNERGVISIMNAFSEMGVDIVD
DDDGLYHVSGHANRPDIERTHEVFKPQMLIPMHGEHRHLRQHAKLGEARGIASLVAVNGM
MVDFAGNRPSVVEYIDTGRTYLDGSVKIGAMDGVVRERIRMALHGHVMVNVIIDEDDTPL
GEPWVETMGLPRNGTSNAELVEVLEGDLTQVMMRMDDKTLLDDDKIEEQIRRATRMTTQN
EVGKKAEVTVVVSRLMGA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagatcgtctgatctacctcccccttggcggcgccggtgaaatcggtatgaac
gcctatgtatacggttacggccccaagggccgcgaacgtcttattctcgtcgacctcggc
gtgactttccctgatatggacagcaccccaggtgttgacctgatcatgcccgacatcacg
tggcttgagaaaaacaaagatcgcctagaggcggttttcatcacccacgcccacgaagac
cacatcggcggtatcgcccatatgtggcgcaaacttggtgcgccggttgtttatgcgcgg
gtctttacggcccaccacgcacgccgcaaaatggaagagcagggcgcggatccgagcgcc
gtcaacaccgttccggtctatcctgccgtcacggaagcggggccgtttaaggtgtccttc
ttccccgtcgcgcactcgattcccgaaagttcgggcctcgtaatcgacacacctgcaggt
cgtatcgtgcacacgggcgacttcaagctcgacgaaacacctgttttgggcgaagccttt
gatcccaaactctgggccgagatcgccaaacctggcgtcaaagctctggtctgtgactca
acgaatgtgttttccgtcaaagcgggccgttccgaggccactgttggcccagaaattgag
cgcctcatcggtgaatccgcgggtatggttgttgcgacgactttcgcgagcaacgttgcg
cgtttgaaaacgcttgcgctcgcagggcagcggtccggacgttcggttgtgctgttggga
cgcgccatgcgtcgcatggtgcaggcgggtatggaaaccggtttgctcaaggatttccca
acggttattcctgttgaagaagcccgcgaaattccccgcaacaacctgttattgttggcc
acgggatcacagggcgaacgccgtgccgccgtcgcgcaactctcgcgcggaaagtacctc
gggatgtcgatgaaagagggcgacacgttgttgttctcgtctaaaactatccccggaaat
gaacgcggcgtgatctcgatcatgaatgcgttctcggaaatgggcgttgatattgtggac
gacgacgatggcctttaccatgtgtccggccacgccaatcggccagatattgaacgcaca
catgaagttttcaagccacaaatgttgatcccgatgcacggtgaacaccgccatttgcgc
caacacgcaaaacttggtgaagcgcgcggcattgcgagccttgttgcggtgaacggaatg
atggtcgattttgctggaaaccgtccctccgttgtcgaatatattgatacaggccgtacc
tatctcgatggctccgtgaaaatcggcgcaatggacggggttgtgcgggaacgcattcgc
atggcgctgcatgggcacgtgatggttaatgtcattatcgacgaggatgacacgccgctt
ggcgagccatgggtcgagacgatgggccttccccgcaacggcacaagcaatgcagaattg
gttgaagtgcttgagggtgatcttacgcaggtgatgatgcgcatggacgacaaaacgctt
ttggacgacgataaaatcgaagagcaaatccgtcgcgcgacacgtatgaccacacagaac
gaagttggcaaaaaggcagaagtgactgttgttgtgagccgtttgatgggggcttag
DBGET
integrated database retrieval system
