Herpetosiphon aurantiacus: Haur_0367
Help
Entry
Haur_0367 CDS
T00614
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
hau
Herpetosiphon aurantiacus
Pathway
hau02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Haur_0367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hau03021
]
Haur_0367
Transcription machinery [BR:
hau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Haur_0367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_23
HTH_20
HTH_31
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ABX03018
UniProt:
A9AU99
LinkDB
All DBs
Position
439342..440517
Genome browser
AA seq
391 aa
AA seq
DB search
MFTRRNVVDCIENPAGSIDSFRAPPAAKAIVGVAQRAWTMTKYETMNVAKNQPELEDAPE
GWELEPGFNDEDVELAIVNLRRKKTLYSEAVEDSVQMYLREIGEVELLTAEEEITLAKQI
ETGRKAEHQLQTEQYATWDERTALERRVDFGNEGRRKLTQANLRLVVSVAKKYIGNHMSF
MDLIQEGNIGLMRAVEKFDYRKGNRFSTYATWWIRQAVTRAIAEQSRTIRLPVHLSESIA
QMRRVAYQLEQALQREATPDELADALGVSLRKVKRMLNASVQPVSLEQPIGKEGQGRVGE
FLADDTDEAPLEQATRMMLQDELADALSQLPDRERQILLLRYGLADGKRRTLEEVGAEFG
ITRERTRQIEAEAMRHLRQPNVGQHLRAYLD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccagacgtaacgtagtagattgcatagagaatcctgcgggttcaatagatagc
tttcgtgcgccgccagcagcgaaagccatagtgggcgtagcccagcgagcgtggacgatg
acaaagtatgaaacgatgaatgtagcaaaaaaccaaccggaactcgaagatgcccccgag
ggctgggagcttgagccgggttttaatgatgaagacgtagaattagcaattgtaaaccta
cgccgcaaaaaaacgctctattccgaggctgtcgaagattcagtccagatgtatttgcgt
gaaatcggcgaggttgagttgctcaccgccgaggaagaaattacgctggccaagcaaatt
gaaactggccgcaaagcggaacatcagttgcaaaccgagcagtatgcaacctgggatgaa
cgtaccgccctcgaacgccgcgtcgattttggtaatgaaggccgtcgcaagctgacccaa
gccaatttgcgcttggtcgtgagcgtcgccaaaaaatatattggcaatcacatgtcgttc
atggatttgatccaagaaggcaatattggtttgatgcgggcagttgagaagttcgattat
cgcaagggtaatcgcttttcaacctatgctacgtggtggattcgccaagcagttacccgt
gcgatcgctgagcaaagccgcaccatccgcttgccagtccacttgagcgaatcaatcgcc
caaatgcgccgcgtcgcttaccagcttgagcaagctttgcaacgtgaagcaacgcccgat
gaattggctgatgccttgggtgtaagtttgcgcaaggtcaagcgtatgctgaatgcttcg
gtacagccagtgtcgcttgagcaaccaattggcaaagaaggccaaggccgcgttggcgaa
tttttggccgacgataccgatgaagcaccgcttgagcaggccacccgcatgatgttgcaa
gatgaattggccgatgcgctctcgcaattgcccgaccgcgaacgccaaatcttgttgttg
cgctatggtttggccgatggcaaacgccgcacgctcgaagaagttggcgctgaattcggg
attactcgcgaacgcacccgccaaatcgaggctgaagcgatgcgtcacttgcgccaaccc
aatgttggtcaacacttgcgagcttaccttgattaa
DBGET
integrated database retrieval system
