Herpetosiphon aurantiacus: Haur_0473
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Entry
Haur_0473 CDS
T00614
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
hau
Herpetosiphon aurantiacus
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hau03021
]
Haur_0473
03009 Ribosome biogenesis [BR:
hau03009
]
Haur_0473
Transcription machinery [BR:
hau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Haur_0473
Ribosome biogenesis [BR:
hau03009
]
Prokaryotic type
rRNA transcription factors
Haur_0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
Mu-transpos_C_2
S1
KH_NusA_C
KH_2
KH_1
TOBE_3
KH_SLS1_1
Motif
Other DBs
NCBI-ProteinID:
ABX03124
UniProt:
A9AV46
LinkDB
All DBs
Position
552446..553780
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AA seq
444 aa
AA seq
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MKSDFYAAISQIAAERGIPRESVQDVVEQALISAYRRYLGSNPPPVDVKIELEPNTGRIR
VYAEKQVVDEVMDDRFEIDIEDARNVRADVEIGETVYVESTPDDFGRIAAQTAKQVVLQR
IKEVERDHIYGEYFDREGEIVTATVQRTAKGNVILEVGRAEAILPQKEQISHDNYRHGQR
LKVYLMEARRDDPRGPRLVASRTHKDLIKRLFEMEVPEIYNGTVEIKSIAREPGLRSKVA
VHARQEGIDPVGSCVGMRGIRIQNIVNELNGEKIDVVQWGADMRVFIANALSPAQVVEVH
LDEGEKTATVVVPDKQLSLAIGKEGQNVRLAAKLVGWRIDIKSASSLLEEERAAAEAREA
AASEQMLQEAALSTAKVETRKVRVDSLVTYQGRQYGPLPVELIGEEVALRAAAQKLNIYF
NDKLIASYIIDDEAGDSDETDTEA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgatttttacgcagctatttcacagattgccgctgaacgtggcattccccgc
gagtcggtgcaggatgttgtcgaacaagccttaatttctgcctatcggcgctatttgggc
agtaatccaccaccagttgacgttaagattgaattagagccaaatactgggcggattcgg
gtttacgctgaaaagcaagtcgtcgatgaagtgatggatgatcgcttcgaaatcgatatt
gaagatgcccgtaacgttcgcgccgatgttgaaattggcgaaacggtttatgtggaaagc
acgcccgacgattttgggcggattgccgcccaaaccgccaaacaggtggtattgcaacgg
atcaaagaagttgaacgcgaccatatctatggcgaatactttgatcgcgaaggcgaaatt
gtcactgccaccgtgcagcgcaccgccaaaggcaacgtaattttagaagttgggcgagcc
gaagcgattttgccccaaaaagagcaaattagccacgacaactatcgccatggccaacgc
ctcaaagtctatttgatggaagctcgccgtgatgatccgcgtggcccgcgcttggtcgcc
tcgcgcacccacaaagatttgatcaaacgcttatttgaaatggaagtgcccgaaatctac
aacggcacggttgaaattaaatcgatcgcccgtgaaccaggtttacgctcgaaagtcgcc
gtccatgcccgtcaagaaggcatcgatccggttggctcgtgcgtggggatgcgcgggatt
cggattcaaaatattgtgaatgaactgaacggcgagaaaatcgacgtggtgcaatggggt
gctgatatgcgggtatttattgccaacgccctcagcccagcccaagtcgtcgaagttcat
cttgatgaaggcgaaaaaacggccacggtggtcgtgccagataaacaattgtcgttggca
attggcaaggagggccaaaacgttcgtttggcagccaaactggttggctggcgcatcgac
atcaagagcgcatcttcactcttagaggaagaacgggctgctgctgaagcgcgtgaggct
gccgcgtcggaacaaatgctgcaagaagcagcgctctcaaccgccaaagttgaaacccgc
aaggtgcgggtcgattccttggtcacctatcaagggcgacaatatggccccttgccagtt
gaactaattggcgaagaagtagcgttgcgagccgccgcccaaaaactcaatatttatttc
aatgacaagctgattgctagctatatcatcgatgatgaggctggtgacagcgacgagacg
gataccgaggcatag
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