Herpetosiphon aurantiacus: Haur_1636
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Entry
Haur_1636 CDS
T00614
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hau
Herpetosiphon aurantiacus
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hau03016
]
Haur_1636
Enzymes [BR:
hau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Haur_1636
Transfer RNA biogenesis [BR:
hau03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Haur_1636
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABX04279
UniProt:
A9B5P6
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All DBs
Position
complement(1893107..1893694)
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AA seq
195 aa
AA seq
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MSEQWRCFMALDLPEPIQAQLLAIQAELQQLGLPIRWSKPENLHLTLQFLGNLAVELLPD
LQTKLNHALTQQTAPTLNCNTWGYFPNASQPQVVWAGFEQWPNDLLQLQQAVVGCSSHIG
IIAETRPWHPHITLGYSKERLTKHQIEQLSSQLQASQWPATPAIYPTCQLIRSISQPQAS
SYQTLVTWQLNQAST
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaatggcggtgttttatggcgctcgatttgcccgagccaattcaggcgcaa
ctcttggcgatccaagccgaattacagcaattgggcttgccaattcgttggagcaagccc
gaaaatctgcatttaaccttgcaatttttgggcaatctagcggttgaattattgcccgat
ttacaaaccaagctaaatcatgccctcacacagcaaactgcaccaaccctcaattgcaat
acatggggttattttcccaatgccagccaaccgcaagtcgtctgggcaggttttgagcaa
tggcccaacgatttgctgcaacttcaacaagcagtcgttgggtgcagcagccacattggc
atcattgccgaaacccgcccatggcatccccacatcaccttgggctacagcaaagagcgt
ttaaccaaacaccaaattgaacaattatcaagccaattgcaagccagccaatggccagca
acaccagcgatctacccaacttgtcaacttatacgcagcataagccaacctcaagccagc
agctaccaaactttagtgacatggcagcttaaccaagcatcaacctaa
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