Herpetosiphon aurantiacus: Haur_3461
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Entry
Haur_3461 CDS
T00614
Name
(GenBank) cellulose-binding family II
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hau
Herpetosiphon aurantiacus
Pathway
hau00040
Pentose and glucuronate interconversions
hau01100
Metabolic pathways
hau02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Haur_3461
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Haur_3461
Enzymes [BR:
hau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Haur_3461
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Ortholog
Paralog
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GFIT
Motif
Pfam:
CBM_2
Pectate_lyase_4
CBM49
NigD_C
Motif
Other DBs
NCBI-ProteinID:
ABX06097
UniProt:
A9B3W1
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All DBs
Position
4355100..4356560
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AA seq
486 aa
AA seq
DB search
MKLSIARRWVIATGLATALIGAIQSPITNAQTGLSCQVNYTLTNQWGSGFQADVVVRNTG
TSVINGWTVAWSAASGQQIGQMWNATFTQSGSQVSAKNVDWNASIAAGGSQSFGFTATTT
GSLAVPSSFTVNGVVCGGSVSPTATRTPAATATRTPIATATRTPAVTATRTPVATTTRTP
IATATVVPTNPPVSNGLIGWATVAGSGLSTTTGGTGGSTVTAANFTELQNYAKSSSPMII
KFSGTMQGTLTVASNKTIIGSNGALIQGNVKISGAQNIILQNFAINGNSCSSYDNCRAGS
DALGISNSHHIWADHLTITNGQDGNFDINNGSDFITVSWSKFGYTTNKEHRFSNLIGSSD
DAASTDSGKLNVTFHHNWWFGGAMQRMPRTRFGKIHVFNNLYTTTGNDYCVSSGYQSKVL
LENNAFIGVNTPHRLHDGDLKAVGNLYQNTSGDQISTGVAFTPPYSYSAEAASSLSSSVQ
AGAGAK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatcaattgcccgacgttgggttattgccaccggcttagccactgccttgatt
ggcgcaatccaaagcccaatcaccaacgcccaaactggcctaagctgccaagtcaattat
acgcttactaaccaatggggcagcgggtttcaagccgatgtggtggtgcgcaacaccgga
accagtgtgatcaacggctggacggttgcttggagtgctgccagcggccagcaaattggc
caaatgtggaatgcgacgtttacccaaagtggcagccaagtcagtgccaaaaatgttgat
tggaacgccagcatcgctgctggtggcagccaaagctttggctttaccgctaccacgact
ggtagcttggccgtgcccagcagctttacggtcaatggcgttgtttgtggcggtagtgtt
agcccaaccgcaacccgcacgccagccgcgactgccacgcgtactccaattgccactgca
acccgcacgccagctgtaaccgccacgcgcacccctgtggcaactactacccgtactcca
attgccacggctaccgtcgttccaaccaatccaccagtcagcaatggcttgattggctgg
gccacggttgctggttcgggcttaagcacaactactggcggcactggtggtagcacagtt
accgcagccaactttactgaattgcaaaactacgccaaatcgtcatcgcccatgattatc
aagttctcgggtacgatgcaaggcacactgacggttgcctcgaacaaaacgattatcggc
agcaatggagccttgatccaaggtaatgtcaaaatctcaggcgctcaaaatattattttg
caaaattttgcgatcaacggcaatagctgctcaagctacgataactgccgcgctggaagc
gatgccttggggattagcaattcgcaccatatttgggccgaccacttgacgattaccaat
ggccaagatggcaatttcgacattaacaatggctctgatttcattacggtttcgtggagc
aaattcggctataccaccaacaaagagcatcgtttctcgaacttgattggtagctcagac
gatgcagcctcgaccgatagcggtaaattgaacgtgaccttccatcataactggtggttt
ggtggggcaatgcagcgcatgccacgtacgcgcttcggcaaaattcacgtattcaataat
ttgtacaccaccactggcaacgattattgtgttagctcaggctatcaatccaaagtgttg
ctcgaaaataatgccttcattggggtcaacacgccgcaccgcttgcacgatggcgatctc
aaggcggtgggcaatctctaccaaaacaccagcggcgatcaaattagtactggcgttgcc
ttcacgccgccctacagctatagcgccgaagctgctagctcactcagcagttcagtccaa
gctggcgcaggagcgaagtag
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