Herpetosiphon aurantiacus: Haur_3651
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Entry
Haur_3651 CDS
T00614
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hau
Herpetosiphon aurantiacus
Pathway
hau03420
Nucleotide excision repair
hau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Haur_3651
03430 Mismatch repair
Haur_3651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hau03400
]
Haur_3651
Enzymes [BR:
hau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Haur_3651
DNA repair and recombination proteins [BR:
hau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Haur_3651
MMR (mismatch excision repair)
Other MMR factors
Haur_3651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABX06287
UniProt:
A9B676
LinkDB
All DBs
Position
complement(4590889..4592814)
Genome browser
AA seq
641 aa
AA seq
DB search
MFDTLNSEQRAAVMAQLGPVLVKAGAGSGKTRVLTYRIAYLIEQGASSDSIVSVTFTNKA
ASELRTRLRDLLGKRSRGLTAGTFHAICGKLLRQHINGRIRNYTANFTIYAGDEQLQLVQ
QAMDGYTGRMPHDLEAPQVLNLISRFKSRMQPPTLARQMASDPVSQYAAAIYRTYQRQLE
RSNAVDFDDMIVMTYKLLFEHHDVLDEVQSRWAHVLVDEYQDTDSAQYALLELLSRPVAQ
RPRSLFAVGDAQQSIYGFRNADYTIINRFTRDFPEAQVVELLTNYRSRQEILDAAYAVMR
HSVAVPALTLKAARRSPPVPALVINEATDDRAEADAIAKSIGNLLSTGRRSKDIAILYRS
RHMSRGLETALRQARIPYSLKGQAGFYDRRVIRDALAFLRIIANPSDSLSMNRIINVPAR
GIGASTIAHLTSKAAALELPLGEALLKREAWEGLSDRASQMVSDWARKVYRWRKLASGSY
PPEGLLQTVLQESGYQSMIEKDWNDPERSDALAHLEELRVAAGEHTSLAAFLQEIALLTN
VEDKDERDAVQLLTIHGAKGLEWPIVYVAGLEEGTLPHERSLVEAGGVEEERRLCYVALT
RAGEQLYLSHAKKRQRNQRNPSRFLDDILVYGRERAKAKAF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacactcaatagcgaacaacgggcggcggtaatggcgcagcttgggccagtt
ttggtcaaggctggcgcgggcagcggtaaaactcgcgtgctgacctaccgcatcgcctat
ttaatcgagcagggcgctagctccgattcgattgtttcggtgaccttcaccaacaaagcc
gccagcgaactgcgtacccgcttgcgcgatcttttgggcaagcgtagccgtggcctgact
gccggaaccttccacgcgatttgtggcaaattgctgcgccaacatattaatggacgaatt
cgcaattacactgccaactttacaatttacgctggcgatgagcaattgcaactggtgcaa
caagccatggatggctataccggacgcatgccgcacgatcttgaagcaccgcaagtgctc
aatttgatttcgcgcttcaaaagccgcatgcaaccaccaaccttagctcggcagatggct
agtgatccggtcagtcaatatgcagcagcgatttatcgcacctatcaacgtcagcttgag
cgctcgaatgctgttgatttcgatgatatgatcgtgatgacctacaagctgttgtttgag
catcacgatgtgctcgatgaagttcaatcgcgctgggcgcatgtgttggtcgatgaatat
caagataccgattcggcccaatatgccttgctcgagttactttcacggccagttgctcag
cgcccacgctcattgtttgcggttggcgatgcccaacaatcgatctatggttttcgcaac
gccgattacacgatcatcaatcgcttcacccgcgatttccctgaagcccaagtggttgag
ttgttgaccaattatcgttcgcgccaagagattcttgatgcggcctatgccgtgatgcgc
cattcggtcgctgtgccagccttgaccttgaaagctgcgcgtcgttcgccgccagtgcca
gccttggtgatcaacgaggctactgatgatcgcgccgaagccgatgcgattgccaaatca
attggtaatttgctgagcacaggtcgtcgcagcaaagatattgcgattttgtatcgttcg
cggcatatgagccgtggcctagaaacggcgctgcgccaagcacggattccctattcgctc
aagggtcaagcggggttttacgatcggcgggtgattcgcgatgctttggcctttttgcgg
attattgctaatcccagcgatagcctgagcatgaatcggattatcaatgtgccagcgcgt
ggcattggcgctagcacaatcgcccatctcaccagcaaagctgctgcactggaactaccg
ctcggtgaagccttgttgaagcgtgaagcatgggaaggcttgagtgatcgagccagccaa
atggtcagcgattgggcacgcaaagtctatcgttggcgcaaattggctagcggcagctac
ccacccgagggcttgttgcaaacggtgctgcaagaaagtggctatcaatccatgatcgaa
aaagactggaacgaccctgagcgcagtgatgccctggcccaccttgaagaattacgggtt
gctgctggcgaacataccagcctcgcagcctttttgcaggaaattgccctgctgaccaac
gttgaagacaaagatgagcgtgatgctgttcaattgctgaccatccacggagccaaaggc
ttggaatggccaattgtctacgtggcgggcttggaagaaggtacattgccccacgaacgt
tcgttggtcgaagcaggcggggtggaagaagagcggcgtttgtgctatgtggccttgacc
cgcgcaggtgaacaactctatctttcgcatgccaaaaaacgccaacgcaaccaacgtaat
ccatcgcgcttccttgatgatattttggtttatggccgtgaacgcgccaaagccaaggct
ttctaa
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