Herpetosiphon aurantiacus: Haur_3880
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Entry
Haur_3880 CDS
T00614
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hau
Herpetosiphon aurantiacus
Pathway
hau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Haur_3880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hau03019
]
Haur_3880
03016 Transfer RNA biogenesis [BR:
hau03016
]
Haur_3880
Enzymes [BR:
hau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Haur_3880
Messenger RNA biogenesis [BR:
hau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Haur_3880
Transfer RNA biogenesis [BR:
hau03016
]
Prokaryotic type
tRNA degradation factors
Haur_3880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_N4BP1_2nd
OB_RRP5_4th
Dehydratase_MU
aRib
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
ABX06514
UniProt:
A9B8G1
LinkDB
All DBs
Position
complement(4872013..4874346)
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AA seq
777 aa
AA seq
DB search
MSEQQVHSVTVELAGRPLTIEAGRVAQLANGAVLVRYGDTVLLAAVTASAEPRDGIDFFP
LTVDYEEKMYAAGKIPGSFFKREGRPTETAILTSRLTDRPLRPLFPKGYYNDVQVSITTL
STDQVNDPGPLAIIGASAALVISDIPFAAPVGAVQMGHIDGVFAVNPVMGLMENSRLDLV
VAGTSEAVMMVEASAYELTEAEMLEAVKRGHEAMQAVIQAQLELAEKCGKPKKEFVAPVV
DTSLQDEIKAWMGNRFLQALNNSDKAAREAATDSLRTDVLEQFSAGVAEEELAARVKAVT
KNYDALVKDEVRASILEQGIRVDGRKVNEIRPIAVDVGVLPRVHGSGLFTRGQTQVLTVA
TLGSPGDEQRLDDLGIETTRHYMHHYNFPAFSTGEARPSRGPRRRDIGHGKLAERALVPV
LPEKDKFPYTMRLVSEVLASNGSSSMASVCGSSLALMDAGVPIKAPVAGVAMGLITGKEA
GQFSVLTDIQGLEDALGDMDFKVAGTTAGITALQMDIKTTGITYEIMQQAFEQARQGRVF
ILDKMNEIINTARNDISQFAPRIITLQIDPSKIGALIGPGGKTIRSIIEQTGAQIDVEDD
GRVFVTTPDADGARMAQSLIEGLTREAKVGEIFTGKVVRIMPYGAFVNVLPGKDGMVHVS
ELDEKRVENVEDVVKIGDELTVMVIDVEPGTGKLSLSRRAILTGETAEQRKSSSSKGGPR
GGGGGGDRGPRPGGDRGPRPEGDRGPRPEGDRPREGGDRGPRPGNGGNDRRGGGFRG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaacaacaagttcatagcgtaactgtcgagctggcgggtcgcccgttaacaatt
gaagcaggtcgggttgcgcagttggccaatggagcagttttggtgcgatatggcgatacc
gttttgctcgccgctgtcaccgcgtcagccgaaccacgcgatgggattgattttttccca
ctgacggttgactatgaagaaaagatgtatgccgcaggtaaaatccccggttcgttcttc
aaacgtgaaggccgcccaaccgaaactgctattttaacctcgcgcttgactgaccgtcca
ttgcgacctttgtttcccaaaggttattacaatgacgtgcaggtctcgattacgacgctt
tcaaccgatcaagttaatgatcctgggccgttggcaattattggtgcttcggcagccttg
gtgatttccgatattccgtttgctgcgccagttggtgcggtgcaaatgggtcatatcgat
ggcgtttttgcagtcaacccagttatgggcttgatggaaaatagccgcctcgatttggtg
gttgctggtaccagcgaagccgtaatgatggtcgaagcgagcgcctacgaattgaccgaa
gctgaaatgctcgaagcggtcaaacgcggccacgaagccatgcaagcggtgattcaagcc
caacttgagttggccgaaaaatgtggcaagcccaaaaaagaatttgtggctccggtcgtc
gatactagcctccaagacgaaatcaaagcttggatgggcaatcgcttcttgcaagccttg
aacaatagcgataaagctgcccgtgaagctgctaccgatagcttgcgcaccgatgtgttg
gagcaattcagcgctggtgtagctgaagaagaattggccgctcgggtcaaggcagtaacg
aaaaactacgatgccttggtcaaagatgaagttcgtgcttcgattcttgagcaagggatt
cgcgtcgatggccgcaaggtcaacgaaattcggcctattgcggtcgatgttggggttttg
ccacgcgttcacggctcgggcttgtttacccgtggtcaaacccaagtgctcactgtagca
acgcttggatcgcctggcgatgagcaacggctcgacgatttgggcatcgaaaccacccgt
cactacatgcaccactacaacttcccagccttctcgactggcgaagctcgcccttcacgc
ggcccacgtcgccgtgatattggccatggcaagttggccgaacgcgctttggtaccagtc
ctgcctgaaaaagacaagttcccctacaccatgcgcttggtctcggaagtcttggcctcg
aacggttcatcgtcaatggcttcggtgtgtggttcatcgctggccttgatggatgctggt
gtgccaatcaaagctccagttgctggcgtggcaatgggcttgatcactggcaaagaagct
ggtcagttcagcgttttgaccgacatccaaggcttggaagatgctttgggcgatatggac
ttcaaggttgctggcacgaccgctggcatcaccgcgctgcaaatggatatcaaaaccacg
ggcattacctatgaaattatgcagcaagcatttgagcaagctcgccaagggcgtgtgttc
attctcgataagatgaacgaaattatcaacactgcccgcaacgatatttcccaatttgcg
ccacggattatcaccctgcaaatcgatccatcgaagattggggcattgattgggcctggt
ggtaagacgattcgctcgattatcgagcaaactggtgctcaaattgatgttgaggatgat
ggccgcgtattcgtgaccacgcccgatgccgatggcgcacgcatggctcaatcgttgatc
gaaggcttgacccgcgaagccaaagttggcgaaatctttactggtaaagttgtgcggatt
atgccgtatggcgcgttcgtcaacgtgttgccaggcaaagacggcatggttcacgtttcc
gagcttgatgaaaagcgggtcgaaaacgttgaagatgtggtcaaaattggcgacgaattg
accgtgatggtgatcgatgttgagccaggcactggcaaattgagcctttcacgtcgcgca
attctgactggcgaaaccgctgagcaacgcaagagcagcagtagcaaaggcggccctcgc
ggtggcggtggtggcggcgaccgtggcccacgcccaggtggcgatcgtggcccacgccct
gaaggtgatcgcggcccacgccccgaaggtgaccgcccacgtgaaggcggcgaccgtggc
ccacgcccaggtaacggtggcaatgaccgccgtggtggtggcttccgcggctaa
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