Herpetosiphon aurantiacus: Haur_4078
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Entry
Haur_4078 CDS
T00614
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hau
Herpetosiphon aurantiacus
Pathway
hau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Haur_4078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hau03400
]
Haur_4078
DNA repair and recombination proteins [BR:
hau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Haur_4078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_22
AAA_29
AAA_23
nSTAND_NTPase5
DAP3
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABX06710
UniProt:
A9AWF1
LinkDB
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Position
complement(5208304..5211090)
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AA seq
928 aa
AA seq
DB search
MSKMTMWQQYLSIKQKYADVILFFRLGDFYETFGDDAKLIAEVLDITLTVRGLSSDENTP
MAGVPYHAADNYIEQLVSRGYRVAICEQMDEMVHKTLQKREVVRIVTPGTLTEPTMLQAE
RNSYLAAILVDRGNVGLAYADLTTGEFCATELRGNEALKQLEGELARLGAAELLVSDAPE
LRPAGMEIAKKQLAQDLAPMRKAERERLLPHERTAKKVEGNNESTWVQGNVTQWPNWHWD
ARTARDALLNQFKSQSLDGFGLGNKALATRAAGALIQYLHETQRDSVAQVRSLRVYDTTR
FMFLDPQTRRNLELTEGAGGQRKGSLIAVLDQTRTPMGARLLRQWISQPLIELGPLTERQ
QAVSCFVEETLVRGELRALFKGVGDIERTINRVVQGIATPRDLVRLREALRLTPDILSQI
ERTGLRSTSPTEAAPSDDDLFDDEPTSNQIDACADICELLEQAIADDPPALLGTWDNARS
DENVIRKGHAAEIDAIVEATRDAARWINELEAKEQQRTGIKTLKVSYNKVFGYYIEVTKA
SGETRIPDDYIRKQTLVNAERYITPELKEYESLILNASEALNEKERQAFRLILRHLANAG
NRLLDLARAIAEFDVYSTLAEVAVRQRFVRPTLRLDDVFVIQGGRHPVVEHNLNEPFTPN
DAHFDADHQIIVLTGPNMSGKSTFLRQVALIGLMAQIGSFVPADYAEIGLLDRIFTRIGA
QDDIATGQSTFMVEMIETANILHNGSPRSLIILDEIGRGTSTYDGLSIARAVVEYIHNQP
RLRAKTLFATHYHELTELANILPRVHNWTLAVAEEGDHVVFLRKVIEGAADRSYGIHVAQ
MAGLPPAVIKRATEVLSELEGKGDREQRREAMRRMNAAGSSAVPQMSLFASNEPNPAVEL
LREMDVTQLTPIEALTKLYELQRLAKVE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatgacgatgtggcagcaatatctgtcgattaagcaaaaatatgccgatgtg
attctgtttttccggctaggcgatttttacgaaactttcggcgatgatgccaagttgatt
gccgaggtgcttgatattaccctgacggtgcgtggcctcagcagcgatgaaaatacgccg
atggcgggtgtgccctatcacgccgccgataattatattgagcaactggtcagtcggggc
tatcgcgtggcaatctgcgaacaaatggatgagatggtgcacaaaaccttgcaaaaacgt
gaggttgtgcggattgtcacgccaggcactctgaccgagccaaccatgctccaagctgaa
cgcaatagctaccttgcggcaattttggttgatcgtggcaatgttggtttggcgtatgcc
gacctaaccaccggcgagttttgtgccaccgaattgcgcggcaacgaggctttgaagcaa
cttgaaggcgaattagcgcgtttgggtgcggctgaactcttggtttccgatgctcctgag
ttgcgtccagccggcatggaaattgccaaaaagcagttagcccaagatcttgcaccaatg
cgcaaggctgaacgcgaacgcttgctaccccacgaacgcaccgccaaaaaagttgaaggt
aataacgaaagcacgtgggttcaaggcaatgtcacccaatggcctaattggcattgggat
gcccgcaccgctcgcgatgccttgctcaatcaatttaaaagccaatcgcttgatggcttt
ggcttgggcaataaagccctcgcaacccgcgccgcaggagcattaattcaatatttgcat
gaaacgcagcgcgatagtgtggcccaagttcgcagcttgcgggtctatgatacaactcgt
tttatgtttctcgacccccaaacgcggcgtaatttggagctaaccgaaggtgctggtggc
caacgcaaaggctcgttgattgcggtgctcgaccaaacccgcacgccgatgggtgcacgc
ctgttacgccaatggatctcacaaccgctgattgagcttggcccactgaccgagcgccaa
caagccgtcagttgttttgttgaagaaaccttggtccgcggcgagttacgggccttattc
aaaggggttggcgatatcgaacgcacaatcaatcgggtggtgcaaggcattgccaccccg
cgtgatttagtgcgattgcgcgaagcgctgcgcctaactcccgatattttgagccaaatc
gagcgtacaggtttgcgctcaaccagcccaaccgaggctgcgccaagtgatgatgatctg
tttgatgacgagccaacaagcaatcaaatcgatgcttgtgccgatatttgcgaattactc
gaacaggcgattgccgatgatccgcccgccttgcttggcacatgggataacgcccgcagc
gacgaaaatgtgattcgcaagggtcatgctgccgaaattgatgcaattgttgaggctact
cgcgatgccgcccgttggatcaacgaacttgaagccaaggaacagcaacgcactggcatc
aaaacgctcaaagtcagctataacaaagtctttggctattacatcgaggtaaccaaggcc
agcggcgaaacccgcattcccgatgattacattcgcaaacaaaccttggtcaatgccgag
cgctatatcacgccagaactcaaagaatatgaatcgctgattttgaatgcctcagaagcc
ttgaacgaaaaagagcgccaagcatttcgcctgattttgcgccatttggccaacgctggc
aatcgtttgctcgatttagcgcgagcaatcgccgagtttgatgtctatagcaccttggcc
gaggtggcggtgcgtcagcgttttgtgcggccaaccttgcgcctcgacgatgtatttgtg
attcaaggcgggcgacatcctgtggttgagcacaatttgaacgagccatttaccccgaat
gatgctcattttgatgctgaccatcagattattgtgctgactggaccaaacatgtcgggc
aaaagcacctttttgcgccaagtggctttgattggcttaatggcccaaatcggctcgttt
gtgcccgctgattatgccgaaattggcctactcgaccgaattttcacgcggattggggca
caagacgatattgctaccggccaatcgacctttatggttgaaatgatcgagaccgccaat
attttacataatgggtcaccacgatcgctgattattctcgatgaaattggccgtggcacc
agcacctacgacgggctttcgattgcccgcgctgtggtcgaatatattcataatcagccg
cgcttacgagccaaaaccctgtttgcaacccactaccacgaactgaccgagctggctaac
atcttgccacgggtgcataattggacgttggcggtggccgaagaaggcgatcatgtagtg
tttttgcgcaaagtgatcgagggtgcggctgatcgctcatatggaattcatgtggctcaa
atggcgggcttgcccccagccgtgattaaacgtgctaccgaagtgctgagcgagcttgaa
ggtaagggtgatcgggagcagcgccgcgaggccatgcgtcgcatgaacgcagcaggcagt
tcggctgtgccccaaatgtcgctatttgcgagcaacgagccaaatccagcggttgagcta
ttgcgcgaaatggatgtaacccaactaaccccaatcgaagccctaaccaaactttacgaa
ttacaacgtttggctaaagtggagtga
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