Herpetosiphon aurantiacus: Haur_4600
Help
Entry
Haur_4600 CDS
T00614
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hau
Herpetosiphon aurantiacus
Pathway
hau03420
Nucleotide excision repair
hau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Haur_4600
03430 Mismatch repair
Haur_4600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hau03400
]
Haur_4600
Enzymes [BR:
hau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Haur_4600
DNA repair and recombination proteins [BR:
hau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Haur_4600
MMR (mismatch excision repair)
Other MMR factors
Haur_4600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
RsbRD_N
AAA_22
ResIII
DEAD
HTH_TIMELESS
Motif
Other DBs
NCBI-ProteinID:
ABX07231
UniProt:
A9B0L3
LinkDB
All DBs
Position
complement(5881776..5884052)
Genome browser
AA seq
758 aa
AA seq
DB search
MTHPLLIGLNAQQQRAVQAIHGPVLVLAGPGSGKTRVLTHRIAYLINEVGVRPYNILAVT
FTNKAAREMRERIGNLIGESRAHDVMMGTFHSICARWLRRDIQHLQRANDFVVYDADDQQ
RVMKQILRELDLSEKQYNPRSIHARISAAKNEMIGVAEFARSVSSYFDEIVLRCYERYEK
QLLANNALDFDDLLLKTVNLFEYHPDVLARYAERYVHVMVDEVQDTNRVQFSLINQVGAG
HNNYFLIGDIQQSIYAWRGARLANVREFEEAHPDVQIIPLEQNYRSTQPILDVAQSIIDA
AYDRRHTTKIWTDQQDGELVSLVEAYDHNEEARWVADEIMRIRGREGRSLDDFAVMYRTN
AQSRAFEEAMISRNLRYRLVGGTRFYERKEIKDVVAYLRIIHNPHDEVSLLRVINVPGRS
IGDRTQQELLQWARNLDVSIWDALELLATNEAQSPPISGRARNAVEQFQKLVASLRDLRH
DLMLGELIQRLLERVPLQELLVAEYGEEEGAERWENILELQNVSMEYLALPTEDQLPRFL
EEVALVSDVDSLDSNKEREPGVTLITLHQAKGLEYPVVFLAGLEEGLLPHGRSVDDPESI
EEERRLLYVGTTRAKQRLYMLYAFKRATWGRTDITIPSRFLGDIPKDLLQRTPTREVKQM
PVHAASQWQSSTPQRTRGTQPSTSSMWSGASGPVRPKRPEREPSAASYSAGDKVRHANFG
EGVVVSSKMVGDDEEVTVAFPGKGVKKLLAAFAKLERV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactcacccgctgctgattgggttgaatgcccaacaacaacgcgcagtccaagcgatt
catgggccagtgttggtgctggctggcccaggctcgggcaagacccgcgtgctgactcat
cggattgcctatttaattaatgaagttggggttcgcccctataacattttagccgtcacc
tttaccaacaaggctgcccgcgaaatgcgcgaacggattggaaacttgattggcgaaagt
cgtgctcacgatgtaatgatgggtacattccactcaatttgcgcccgttggttgcgccgc
gatattcagcatctgcaacgcgccaacgattttgtggtttacgatgccgatgatcagcaa
cgggtaatgaagcagattttgcgcgaattggatttaagcgagaagcaatataatccgcgt
tcaattcatgcccgcatctccgctgctaaaaacgaaatgattggggttgctgagtttgcc
cgcagcgttagcagctattttgatgaaattgtcttgcgctgttatgagcgctacgaaaaa
caattgttagccaataatgccctcgattttgatgatttgctgctcaaaaccgttaattta
ttcgaatatcatcccgatgtgctagcgcggtatgccgaacgttatgtgcatgtcatggtc
gatgaagtgcaagataccaatcgggtgcaattttcgttgatcaatcaagttggtgcaggc
cataacaactactttttgatcggcgatattcagcaatcaatttatgcttggcgtggggcg
aggttggcgaatgtgcgcgaatttgaagaagcccaccctgatgtgcaaattattccactg
gagcaaaattaccgttccacccaaccaattcttgatgtcgcccaatcgatcatcgatgcg
gcctatgatcgtcgccataccaccaaaatctggactgatcagcaggatggcgagttggtt
tcgttggtcgaggcctatgatcacaatgaagaagcgcgttgggtggccgatgaaattatg
cgtattcgcgggcgtgaaggccgttcgctcgacgattttgctgtgatgtatcgcaccaac
gcccaatcccgtgcctttgaagaggccatgatcagccgcaacctgcgctatcgattggtc
ggtggcacgcgcttctacgaacgcaaagaaatcaaagatgttgtggcctacctacgaatt
atccacaatccccacgatgaagttagtttgctacgggtgattaacgtgccaggccgaagc
atcggcgatcgcactcagcaagagctattgcaatgggcacgcaatctcgatgtctcaatt
tgggatgccctcgaactgctagctactaacgaagcccaaagtccgccgatcagcgggcga
gcacgcaacgccgttgagcaatttcaaaaactggtagcaagcctacgcgatctgcgccac
gatttgatgctcggcgagttgattcagcgcttgcttgagcgggtgccattgcaagagttg
ctggtggcagaatatggcgaggaagaaggcgctgagcgttgggaaaatattctcgaattg
caaaacgtcagtatggaatatctggccctgccgaccgaggatcaattgccacgcttttta
gaagaagtggccttggttagcgatgttgatagccttgattccaacaaagagcgcgagcct
ggtgtgaccttgattaccttgcaccaagccaagggtttagagtatccggtagtatttttg
gctggcttagaagaaggcttgttgccgcacggacgctcagttgacgaccccgaaagtatc
gaggaagagcgtcgtttgctctatgttggtacaacccgcgccaaacaacgactgtacatg
ctctatgctttcaaacgagcaacttggggccgcaccgatatcacgattccttcacgcttt
ttgggcgatattcccaaagatttgctgcagcgcacgcccacccgtgaagtcaaacaaatg
ccagttcatgccgcaagccaatggcaaagcagcacgccgcaacgcacgcgaggcacgcaa
ccaagcaccagcagcatgtggagtggcgcgagtggaccagtccggccaaaacgccccgaa
cgtgagccaagcgccgccagttatagcgctggcgacaaagtgcgccatgctaatttcggc
gagggcgtggtggtcagtagcaaaatggtcggcgacgacgaagaagttaccgtggcgttt
ccaggcaaaggcgtgaaaaagctcttggccgccttcgccaagctcgaacgggtttag
DBGET
integrated database retrieval system
