Herpetosiphon aurantiacus: Haur_4680
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Entry
Haur_4680 CDS
T00614
Name
(GenBank) guanine-specific ribonuclease N1 and T1
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
hau
Herpetosiphon aurantiacus
Brite
KEGG Orthology (KO) [BR:
hau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hau03019
]
Haur_4680
03016 Transfer RNA biogenesis [BR:
hau03016
]
Haur_4680
Enzymes [BR:
hau01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
Haur_4680
Messenger RNA biogenesis [BR:
hau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Haur_4680
Transfer RNA biogenesis [BR:
hau03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Haur_4680
Prokaryotic type
Haur_4680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
ABX07311
UniProt:
A9B1C4
LinkDB
All DBs
Position
complement(5977424..5978035)
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AA seq
203 aa
AA seq
DB search
MSTRLRRGLEFGLGLIILIGLIWFNNLPSSDQPTPSPNPSATIEISSRGLPSSTPQQATS
RPRQTAVATAKPTTRPRQTVMPTAKPTTRPRPSPTVAPTARATRTPERDSAGLRYVAFGD
LPIQAQATIRLIEQGGPFPYSKDGAIFNNREQILPSKPRGYYREYTVETPGSADRGARRI
VAGDNGELYYTDDHYASFRRVRQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccgtttacgtcgcggtttggagtttggccttggcctgattatcttaatcggc
ttgatttggttcaacaatctgcccagcagcgatcaaccaacgcccagcccaaatcctagt
gcaactatcgaaatcagttcgcggggtttgccatcgagcacgccacaacaagcgaccagc
cgaccacgccagactgccgtggcaaccgccaaaccaaccacgcggccacgccagacggtc
atgccgactgccaaaccaaccacgcggccacgcccaagcccgacggttgcgccgaccgcc
cgcgctacgcgcacgcctgagcgcgattcggctggattgcgctatgtggcgtttggcgat
ttgccaattcaagcccaagctacaattcgcttgatcgagcagggcgggccgtttccctat
agcaaagatggggcaattttcaacaatcgtgagcaaattttgccgagcaaaccacgcggc
tactatcgcgaatacaccgtcgaaacgcctggctcagccgatcgcggggcacgccgaatt
gtggctggcgataatggcgagttgtattacaccgatgatcattatgcaagttttcggaga
gtacgccaatga
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