Halioglobus sp. Uisw_031: ABXT62_01770
Help
Entry
ABXT62_01770 CDS
T11650
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
haui Halioglobus sp. Uisw_031
Pathway
haui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABXT62_01770 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haui03021
]
ABXT62_01770 (rho)
03019 Messenger RNA biogenesis [BR:
haui03019
]
ABXT62_01770 (rho)
Transcription machinery [BR:
haui03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ABXT62_01770 (rho)
Messenger RNA biogenesis [BR:
haui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABXT62_01770 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
Mor
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
XOJ87256
LinkDB
All DBs
Position
complement(393524..394792)
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTDLKAKSTQDIIDIAKEMGLDNMARSRKQDIIFAVLKRHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDSERYFALLKVDEVN
LDKPENSKHKALFENLTPLFPDQRLTLETGNGSTEDLTGRIIDLVAPIGKGQRGLLVAPP
KAGKTIMMQSIAQAIITNNPECYIIVLLIDERPEEVTEMQRSVGIRGAEVVASTFDEPPS
RHVQVADMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERP
KRFFGAARNIEEGGSLSIIATALVDTGSKMDEVIYEEFKGTGNLELHLDRKISEKRVYPA
INIRRSGTRREELLTADDELQRMWILRKLLHGMEDTAAIEFLTDKLKETKTNEEFFKSMK
RK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgacttaaaagcaaaatctacccaagacatcattgatatcgcgaaagag
atgggcttggacaacatggcccgctcgcgcaaacaagatattatttttgccgtactgaag
cgtcacgccaaaagcggtgaagacatttacggtgatggcgtactggagattttacaggat
ggctttggcttcctacgctccgccgacagctcgtacttggccggccccgacgatatatac
gtttcacccagccaaattcgccggtttaacctgcgcacgggtgacaccatctccggcaaa
attcgcccacctaaagacagcgagcgctactttgcccttctaaaggtggacgaggtcaac
ctcgacaagcctgaaaattccaaacacaaggccctgtttgaaaacctcacaccgctgttc
ccagaccagcgcctgaccctggaaacaggtaacggtagcaccgaggatctcacaggccga
attattgatctggttgcacccatcggaaaaggtcagcgcggattactggttgcaccgccc
aaagcgggcaaaacgatcatgatgcaaagtatcgcccaagcgataatcaccaacaacccc
gagtgttacatcattgtgctattgattgatgaacgcccggaagaagtgactgaaatgcaa
cgctcagtgggcattcgaggcgccgaagtggtggcttctacctttgatgagccgccgtcg
cgccacgtgcaggttgccgacatggtgatcgagaaagccaaacgtctggtagaacacaaa
aaggacgtggtgatcttgctagattcgataactcgcttggctcgcgcctacaacaccgtt
attcctagctctggaaaagtattgaccggcggtgttgacgcccatgctctggagcgccca
aagcgcttctttggcgcagcgcgtaatatcgaggaaggcggcagcctttcaattattgcg
acggccctggtcgacaccggctccaagatggatgaagtgatctatgaagaatttaaaggc
actggcaacctagaattacatctagatcgcaagatctctgaaaagcgcgtttatcccgcc
atcaatattcgtcgctctggcacgcgccgggaagagctgcttaccgcggatgatgaatta
cagcgcatgtggatcctgcgcaaactgctgcacggcatggaagacaccgccgctattgag
ttcttgactgacaagcttaaagaaaccaagacgaacgaagaattctttaagtctatgaag
cgcaagtaa
DBGET
integrated database retrieval system
