Hafnia alvei: AT03_00300
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Entry
AT03_00300 CDS
T03425
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hav03000
]
AT03_00300
Transcription factors [BR:
hav03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AT03_00300
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIU70993
UniProt:
A0A097QX08
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Position
58652..59833
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AA seq
393 aa
AA seq
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MFAKRYRITLLFNANKAYDRQVVEGVGEYLQASQCDWDIFIEEDFRCRIDNIKDWLGDGV
IADFDDREIEALLSHLEVPIVGVGGSYHREEDYPPVSYIATDNHALVESAFLHLKEKGIN
RFAFYGLPTNSDKRWAQEREYSFRQLVAKEQYQGVVYQGMETTPDNWQYAQNRLADWVQT
LPPQTGIIAVTDARARHLLQVCEHLDIAVPEKISVIGIDNEELTRYLSRVALSSVAQGTR
QMGYRAAKMLHQLLSSGKPSVPQRVLVPPIKVVERRSTDFRSLSDPSVIQAMHFIRHHAC
EGIKVEQVLDAVGMSRSNLEKRFKDETGQTIHAVIHEEKLDRARNLLIATSLSINEISQM
CGYPSLQYFYSVFKKGYSMTPKDYRDRFGDNIG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaacgctatcgcattacattgttattcaatgccaacaaggcgtatgaccgt
caggttgtggaaggtgtgggtgagtatttacaggcttctcagtgtgattgggatattttc
atcgaagaagactttcgttgccgtatcgacaatatcaaagattggctgggcgatggcgtg
attgccgattttgacgaccgtgaaatcgaagcgttgttaagccatctcgaagtgccgatt
gtcggcgtcggtggctcttatcatcgtgaagaagactatccaccggtttcttacatcgcc
accgataaccatgcgctggtcgaaagcgcatttttgcatctcaaagaaaaaggcatcaat
cgcttcgctttttatggcctgccaaccaacagtgataaacgatgggcgcaagagcgagag
tattctttccgccagttggtcgctaaagagcaatatcaaggcgtggtgtatcaaggaatg
gaaaccacgccagataactggcaatacgcacagaaccgcctagctgactgggtgcaaacg
ctgccgccacagacggggattattgccgttaccgatgcgcgtgctcgccatctgttacag
gtatgcgagcatcttgatattgccgtgcctgaaaaaatcagcgtcatcggtatcgataac
gaagagctcacgcgatatttatcgcgcgtggcgctttcgtcggtcgcacagggcacgcgc
cagatgggctatcgcgcagctaaaatgctgcaccagctgctatctagcggaaagccgtca
gtacctcaacgtgttttagttccgccgataaaagtcgttgaacggagatcgaccgatttc
cgctcgctaagcgatccgtccgtcattcaagccatgcattttattcgtcaccatgcctgt
gaagggatcaaggttgagcaggttttggatgccgtgggcatgtctcgttcaaatctagag
aagcggtttaaagatgaaacagggcaaaccattcatgccgtgatccatgaagaaaagttg
gatcgcgcccgcaatctcttaatcgccacctcgctatcgatcaatgaaatttctcagatg
tgcgggtatccgtcgctgcaatatttctattcagtatttaagaagggatacagcatgacg
ccgaaggattatcgcgatcgctttggtgacaatattggataa
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