KEGG   Hafnia alvei: AT03_00415
Entry
AT03_00415        CDS       T03425                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hav  Hafnia alvei
Pathway
hav03030  DNA replication
hav03410  Base excision repair
hav03420  Nucleotide excision repair
hav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AT03_00415
   03410 Base excision repair
    AT03_00415
   03420 Nucleotide excision repair
    AT03_00415
   03440 Homologous recombination
    AT03_00415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hav03032]
    AT03_00415
   03400 DNA repair and recombination proteins [BR:hav03400]
    AT03_00415
Enzymes [BR:hav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AT03_00415
DNA replication proteins [BR:hav03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AT03_00415
DNA repair and recombination proteins [BR:hav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AT03_00415
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AT03_00415
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 HHH DUF2529
Other DBs
NCBI-ProteinID: AIU71013
UniProt: A0A097QX27
LinkDB
Position
complement(88436..91240)
AA seq 934 aa
MAEIPENPLILVDGSSYLYRAYHAFPPLTNRAGEPTGAMYGVLNMLRSLMLQYQPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLREQIEPLHKMVQAVGLPLLAVSGVEADDVIGT
LAQAAEKAGRHVLISTGDKDMAQLVTPNITLINTMNNTILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGSLKQIYSDLDKVATLSFRGAKTMGAKLELNK
DKADLSYLLATIKTDVELDITCDDLQLKPMDTEQLHELFSRYEFKRWLEDAEAGSWLSGE
KKAPTARKSAKAASEPLEAAVVEEATSVLSQENYQTILDEPALDNLIASLKAAKVFAFDT
ETDSLDVLTTNLVGLSFATAPGVAAYIPVGHDYLDAPDQLSRDTVLAKLKSLLEDDNLQK
VGQNLKYDQGVMARYGIELKSIAFDTMLESYDLDSVAGRHDMDSLAERHLNHKTITFEEI
AGKGKSQLTFNQIALEQAAPYAAEDADVTLQLHLKLWPQLEKEAGLKKVFTDIDMPLVPV
LSRMERTGVLIDSHILGKHSQELAIRLDELEKKAHEAAGEPFNLSSPKQLQAILFEKQKL
PVVKKTPGGAPSTNEEVLAELAEQGFELPTIILEHRGLAKLKSTYTDKLPQMINGATGRV
HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPQGYKIVAADYSQIELRIMA
HLSGDKGLLTAFAAGKDIHRATAAEVFGLALEDVTSEQRRSAKAINFGLIYGMSAFGLAR
QLNIARGEAQRYMDLYFERYPGVLEYMERTRQQAAEQGYVETLDGRRLYLPEIHSRNGMR
RKAAERAAINAPMQGTAADIIKRAMIAVDAWLLEQKEPLVRMIMQVHDELVFEVHESIID
QTVEKVRELMEKSLELAVPLKVDVGTGENWDQAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcagaaatccctgaaaaccccctgatcctagttgatggatcctcatacctgtaccgt
gcataccatgcttttcctccgttaacgaaccgtgcgggagagcctacaggggcaatgtat
ggcgtgttgaatatgctgcgcagcctgatgctgcagtatcagccaagtcacgtcgctgtg
gtattcgacgccaaaggaaagactttccgtgatgagttgtttgctgagtacaaatcacat
cgtccacctatgccagatgacttacgtgagcaaatagagccgctgcataaaatggttcag
gccgttggtttgccccttttggccgtttctggcgtcgaggctgatgatgttattggtacg
ttggcgcaggctgctgaaaaggcgggacgccatgtattgatcagcaccggtgataaagat
atggcgcagcttgtgacgccaaatatcacgttgatcaacacgatgaataacaccattttg
gggccacaggaagtttgtgagaagtatggtgtgccaccggagttaatcatcgatttcctc
gccctgatgggggactcctcggataacattccaggcgtacctggggttggcgagaaaacg
gctcaggcgctgctgcaaggtattggtagcctaaaacagatctatagcgatttggataaa
gtggcgacgctgagtttccgcggtgccaaaacgatgggcgctaagctggagctgaataaa
gataaggccgatctttcatacctgctggcgacgattaaaactgacgttgagttggatatt
acctgcgacgatctccagctcaagccgatggatactgaacaactgcacgaattatttagt
cgctatgagtttaaacgctggttagaagacgctgaggctggttcttggctcagtggtgaa
aagaaagcaccaacggcgcgtaaatccgcgaaagctgccagtgagccgcttgaggccgct
gtcgttgaagaagctacgtcggttttatcacaggaaaattaccaaactattctggatgag
ccggcgctggataatttgatcgccagcttaaaagccgcgaaggtctttgccttcgatacg
gaaactgactctctggatgtcttaacgaccaatctggttggtctgtcatttgcgactgcg
cctggcgtggcggcttatattccggtcggccatgattatctcgatgcgccagatcaactg
agccgtgataccgttttggcgaagttaaaatccctattggaagatgacaatctgcagaaa
gttgggcagaacctaaaatacgatcaaggcgtaatggcgcgttatggcattgagctcaaa
agcattgcgttcgacacgatgctggaatcgtatgatctcgatagcgttgccggtcgccat
gatatggatagcttggcagagcgccacttgaatcataaaaccattacctttgaagaaatt
gcgggtaagggtaaatctcaactgacctttaaccaaattgcacttgagcaggctgcgcct
tatgcggcagaagatgctgatgtgactttacagctgcatctcaaactttggccacagcta
gaaaaagaagcgggtttgaagaaagttttcaccgatatcgatatgcctttggttccggtg
ctttcgcgtatggagcgaaccggcgtactgatcgatagtcatattctgggcaaacattct
caggagctggctatccgtttggatgagctggagaagaaggcacatgaggctgcaggtgaa
cccttcaacctctcctcgccaaaacagctacaggcgattttattcgaaaagcagaagctg
ccggtggtgaaaaaaacgccgggtggagcgccttcaacaaacgaagaagtgctggctgaa
ttagcggagcaaggttttgaactgccaaccattattttggaacatcgcggtttagcgaag
ctaaaaagtacgtatacggataagctcccgcagatgatcaatggcgcgactggtcgggtt
catacctcttatcaccaagcggttaccgcaaccggacgactttcttccagcgatcctaac
ctgcagaatatcccagtacgtaatgatgaaggacgccggatccgtcaggctttcattgcg
ccacagggctacaaaattgttgcggccgactactctcagattgagttacgcatcatggcg
cacttgtcgggtgacaagggactactgactgcgtttgccgctggtaaagatattcaccgt
gccacggcggcagaagtctttggcttagcgcttgaagatgtcaccagtgaacagcgccgc
agtgctaaagcgattaactttggactgatttatggaatgagcgcgtttggtttggctcgt
cagttgaatattgctcgtggcgaagcgcagcgctatatggacctctattttgagcgttat
cctggcgtgctggaatatatggagcgcacacggcagcaggcggcagagcagggatatgta
gagacgctagatggccgtcgcctctatctgcctgaaattcattcccgtaacggtatgcgc
cgtaaggcggcagaacgcgccgcgatcaacgctccgatgcaaggaaccgcggctgatatt
atcaagcgtgcgatgatcgccgttgatgcatggttattggaacagaaagaacctttagtt
cgcatgattatgcaggtgcacgatgaattggtctttgaagttcatgagtccatcatcgat
caaacggttgagaaagttcgtgaactcatggagaaaagccttgagttggcggttccgcta
aaagttgatgtgggtaccggtgaaaactgggatcaagctcactaa

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