KEGG   Hafnia alvei: AT03_01460
Entry
AT03_01460        CDS       T03425                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
hav  Hafnia alvei
Pathway
hav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AT03_01460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hav03400]
    AT03_01460
Enzymes [BR:hav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT03_01460
DNA repair and recombination proteins [BR:hav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AT03_01460
SSDB
Motif
Pfam: PriA_3primeBD WHD_PriA PriA_C DEAD ResIII Helicase_C Zn_ribbon_PriA AAA_30 AAA_22 Zn_ribbon_6 AAA_19 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AIU71197
UniProt: A0A097QXP0
LinkDB
Position
complement(296960..299155)
AA seq 731 aa
MSVAHVALPVPLPRTFDYLLPAGVKPAVGVRVSVPFGQRKMIGIITGVSEHSELPLENLK
SIHHIIDDESLFSSRMWHMLRWAADYYHYPIGEVLFHALPVMLRQGKPAQHGQLWQWVIT
EQGKATLPETLKRAPKQQQALAMLLQRPLYRHQVVECDLTDAALQSIKAKGLAELRAESP
ELQDWRKNYAVNGERLKLNTEQATAVGAIRSEDNQFSAWLLAGVTGSGKTEVYLSVIENI
LAQGRQALVLVPEIGLTPQTIARFRERFNAPVDVLHSGLNDSERLAAWLRARNGESAIVI
GTRSALFTPFARLGVIIIDEEHDGSYKQQEGWRYHARDLAVFRAHQEDIPIVLGSATPAL
ETLHNVELGKYRRLRLTQRAGNAKPATQHLLDLKGLPLKAGLAQPLLQRMKQHVDAGNQV
ILFLNRRGFAPALLCHECGWIAECQRCDHYYTLHQQQHHLRCHHCDSQKPIPRQCPQCGT
TNLVPVGLGTEQLETELAALFPDTPITRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM
LAKGHHFPNVTLVALLDVDGALFSADFHSAERFAQLYTQVSGRAGRAGKQGEVILQTHHP
EHPLLLTLLNQGYDAFAEQALKERKSVFLPPYTSHIMVRADDHDNQNAPQFLQQLRNLLE
ASPLRDESFWILGPVPALQPKRGGRFRWQLLLQHPSRARLQKIVKGTLPLIGTLPTVKKV
KWTVDVDPTDN
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgtcggtcgctcacgtagctttacccgttccattgccacgcacctttgattaccttctg
cccgcaggtgtgaaacccgccgtgggtgtacgggtcagtgtgccttttggacagcgtaaa
atgatcggcattatcaccggcgtcagcgagcacagcgaacttccgctcgaaaatttaaag
tcgattcaccatatcattgacgatgaatcgctattttcctcccgcatgtggcacatgctg
cgctgggcggcagactattatcactacccgatcggcgaggttttatttcatgcgctgccg
gtgatgctacgtcaggggaaacccgcccagcatgggcaactctggcaatgggtgatcacg
gaacagggcaaagcgaccctacctgaaacactcaaacgcgcccccaagcagcagcaagcg
ctcgccatgttgttgcagcggcctctgtatcgccatcaggtcgttgaatgcgatctcacc
gatgccgcactacaaagcatcaaagccaaagggctggccgagttacgcgctgagtcgcca
gagcttcaagactggcgtaaaaactatgcggtaaacggtgagcgcttaaagctcaacact
gaacaagccaccgccgtgggcgcgattcgtagcgaagacaaccagtttagcgcatggctg
ctggcgggcgtgaccggctctggcaaaaccgaagtttatttaagcgtcatcgaaaatatt
ctggcacagggccgccaagcgctggttttagtgcctgaaataggactcaccccgcaaacc
attgcccgttttagagaacgcttcaacgcaccggttgacgttcttcactctggtttaaac
gacagcgaacgcctcgcggcttggctacgtgcacgcaacggcgaaagcgccatcgttatc
gggacgcgctcagcgctgtttacgccctttgctcgcttaggcgttatcatcattgatgaa
gagcacgatggttcttataagcagcaggaaggctggcgctaccacgcgcgtgatttagcc
gtattccgcgcacatcaggaagatatccctatcgtgctgggttcggctacacccgcatta
gaaacattgcataacgttgagttgggtaaataccgtcgtttgcggctcacgcagcgagcg
ggaaacgcaaaaccagccacccaacacttgctcgatttaaaaggcctgccgctaaaagcc
ggtcttgcacagcccttgctgcaacgcatgaaacaacacgttgatgccggtaatcaggtg
attttatttttaaaccgccgaggttttgctccagcgctactgtgccatgaatgtggctgg
attgccgaatgtcagcgctgcgatcattactacaccctgcatcagcagcagcaccatttg
cgctgccatcattgcgacagccaaaagccaatcccgcgtcagtgcccacagtgtggcacc
accaatttagtgcctgttggattgggaacggagcaattagaaaccgagctcgcggcgctt
ttccctgacacgccgattacccgcattgaccgcgataccaccagccgcaaaggcgcatta
gagcaacaattggctgaagtacaccgcggtggcgctcgtatcttgatcggcacccaaatg
ctggcgaagggccatcactttcctaacgtcacgctggtagctttgcttgacgtagacggc
gcgctgttttccgctgattttcactctgccgaacgttttgcccaactttatacgcaggta
tcagggcgcgcgggccgcgcaggaaaacagggcgaagtcatattacaaacccatcaccca
gagcaccctttactgctgacactgcttaaccaaggctatgacgcgtttgccgagcaggcc
ttaaaagagcgcaaaagcgtatttcttcccccgtataccagccacatcatggtacgcgcc
gacgatcacgataaccaaaacgcacctcagtttttgcagcaattaagaaatctattagaa
gccagcccgctgcgtgatgagtcattctggattctagggccggtacccgcgctgcaaccc
aaacgcggaggacgattccgctggcagttgctgcttcaacatccgtctcgtgcccgttta
cagaaaattgttaaaggcacactgccactgattggcacgttgccaacggtgaaaaaagta
aaatggacagtggacgttgaccctaccgataactga

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