Hafnia alvei: AT03_02380
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Entry
AT03_02380 CDS
T03425
Name
(GenBank) transcriptional regulator
KO
K05880
transcriptional activator for dhaKLM operon
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hav03000
]
AT03_02380
Transcription factors [BR:
hav03000
]
Prokaryotic type
Other transcription factors
Others
AT03_02380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
AAA_5
GAF
AAA_2
AAA_16
HTH_50
Mg_chelatase
HTH_23
AAA
AAA_7
BET
Motif
Other DBs
NCBI-ProteinID:
AIU74756
UniProt:
A0A097R7P9
LinkDB
All DBs
Position
complement(500272..502161)
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AA seq
629 aa
AA seq
DB search
MRPAQPIYQSWIRCQKLMQPMPWKMPHRAAGATLRSICQRKNDLLVLGQAALEDAYEYME
SRPCVLQILDESGCLLWQCGHIKTRTALAELGFDIGSYWAEGHIGTNAPALAMRDGNPVQ
VHGDEHFKQALRAWHCCATPVYDNSGRQRAVIVIACLNHDYAASDLPLTLAIAREIGNSL
HTDALLSETNRHLNELYALLDGVEDGVLAWDHNGCLQYLNHRAAGILLLDEQNSLGRPLP
SLITLPSLLQHAIEQRLPLNHVEMTFESRKQFIATLITLKPVPDGEHCGFIALLHPLDQL
RRLVNHQLGKVSQTFEQMPAASLDMRRLLRYGRQAARGQHPILLQGEEGVGKELLAQAIH
NASERANGSYIAINCQTLVEGQFAKELLGSDATETDSGLPSKFELANGGTLYLEQIEYLP
PEMQSALLQIIKTGVLMRQNSSRVIPVDVRIIAATGANLPLLVKQGRFRRQLFYTLQSFE
LQIPPLRQRQSDIPLLVTHHLNTLGQHFHCRYHVDEAVLLQLRDYPWPGNDQELKGVVER
AAMICQHNHIRMADLPEHLMTEKLAVEPESPLLMPVMSLQDAERQAIIRAAHAAQGKPHD
MARMLGIGRTTLWRKLKQYQLEMEQFKNE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctgcacagcccatttatcaatcgtggatccgctgccaaaagctgatgcagccg
atgccgtggaaaatgccacatcgtgccgcaggcgcaacgttacgctcgatttgccaacgt
aaaaacgacctgctggttttgggacaagcggcgttagaagacgcctacgaatatatggag
tctcgtccctgcgttttgcagatcctagacgaaagcggctgtttgctttggcaatgtggg
catataaaaacacgcacggctctcgctgagcttggatttgatatcggcagttattgggct
gaagggcacatcggcaccaatgcgcccgccttagcaatgcgtgacggaaacccggtgcag
gttcacggcgacgaacattttaagcaagccttacgtgcgtggcactgctgcgcaacgccg
gtctacgacaacagtggtcggcaaagagcggtgattgtcatcgcatgcctgaatcatgac
tatgccgccagcgatttgcctttaacactggcgattgcccgcgagatcggcaactcactg
cacaccgatgcgctgctctccgaaaccaatcgccaccttaacgaactgtatgcgttgtta
gacggcgtggaagacggagttttagcgtgggatcacaacggctgcctgcaatatcttaac
catcgtgccgctggcatcttgctcttggatgagcaaaacagcctcggccgcccacttccc
tcattgatcacgctgccttctctgctgcaacacgccattgagcaacgcctaccactcaat
catgttgagatgacctttgaaagccgtaagcagttcatcgcaacgttgataaccttaaag
cccgtacctgatggcgagcactgtggattcattgcattgctgcatccgctggatcagcta
cgacgcttggtgaatcatcaactcggcaaagtcagccaaacctttgagcaaatgcctgcg
gcatcgttagatatgcggcggttactgcgatatggccgtcaggccgcacgaggccagcac
cctattttgctgcagggggaagaaggcgtcggtaaagagctgttagcgcaggcgattcat
aatgccagcgaacgggcaaacggctcatatatcgccataaattgccaaacgttggttgaa
ggccagtttgccaaagagctgctcggcagcgatgccaccgaaaccgattcgggtttaccc
agcaaatttgagctggcaaacggcggtactctctatctcgagcaaattgaatatttgcca
cctgaaatgcagtcagcgctgctacaaatcatcaaaaccggcgtgcttatgcgacagaac
tccagccgcgtgattccggtcgacgttcggatcattgcggcaaccggcgctaatttacca
ctactggtgaaacaggggcgttttcgtcgtcagctgttttatacgctgcaatctttcgaa
cttcagatcccaccgcttcgccagcgacaatccgatattcctctgctggtgactcatcat
ctgaatacgttaggccagcactttcattgtcgttatcacgtcgatgaagccgtgctatta
cagctgcgtgattacccttggccggggaacgatcaggaattaaagggcgtggttgagcgc
gccgcgatgatttgccagcataaccacatccgcatggccgatttacctgagcatttgatg
acggaaaagttggcggttgagccagaaagcccattactgatgccggtgatgtcattgcaa
gacgccgagcgtcaggcaattatccgggccgctcatgccgcacaggggaagccacatgat
atggcgagaatgctggggattgggcgcactacgttatggcgcaaactgaaacaatatcag
ttggagatggaacagtttaagaatgagtga
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