Hafnia alvei: AT03_02480
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Entry
AT03_02480 CDS
T03425
Name
(GenBank) transcriptional repressor IclR
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hav03000
]
AT03_02480
Transcription factors [BR:
hav03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AT03_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HTH_Crp_2
DUF7343
MarR
Rrf2
HTH_47
TrmB
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AIU71358
UniProt:
A0A097QXZ5
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Position
complement(524916..525755)
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AA seq
279 aa
AA seq
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MATTVPVKRGKKPRTATPATTPAATGQVQSLQRGLRLLELIAEAHGSVALTDLAQQAGLP
NSTTHRLLSTMQQQGFVQQVGDLGLWTIASHAFFVGSSFLQSRNLLAIVHPILRRLMEDS
GETVNLAVLDVSDFQAVIIDQVQCTQLMRMSAPIGGKLPMHASGAGKAFLSTVSDTHLVE
LLHKKGLHSYTPHTRSNPNSLKEELAHIRKQGFSFDDEEHALGLRCIAACIYDEHQEAFA
AISISGPVSRITDDRVIEIGALVIKAAKEVTLAYGGRHS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaccgtgcccgtaaaacgtggtaagaaaccacgtaccgcaacgccagccacc
actcccgcagccaccggacaggttcaatccttacagcgtggattgagattgttggaatta
attgccgaagcacacggcagcgtagcgctcaccgatttagcccaacaagccggtttgccc
aactcaacgactcaccgtcttttgagcaccatgcagcaacaaggattcgtccagcaagtc
ggcgatcttggtctgtggaccattgcctcacacgctttcttcgtgggaagtagttttttg
cagagccgcaacctgctggccattgtccatccgattctgcgccgcttaatggaagattct
ggtgagaccgtgaatttggccgtgctcgatgtcagcgattttcaggctgtgattatcgat
caggtacagtgtacccagctgatgcgcatgtctgcgccaattggcggcaaactgccgatg
catgcctctggtgcagggaaggcgtttttgtcgacggtcagtgatactcatttggttgaa
ttactgcataaaaagggtttgcacagctacacgccgcacacccgcagcaatcccaatagc
ctgaaagaagagctggcccatattcgtaaacagggattttcttttgacgatgaagaacat
gctctcggcctgcgctgtattgccgcctgtatctatgatgagcatcaggaagcctttgcc
gctatttctatttctggccccgtttctcgtatcaccgacgatcgcgtgatcgaaattggt
gccttagtgattaaagcagcgaaagaagtcacgctagcttatggcggcagacattcgtaa
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