Hafnia alvei: AT03_03125
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Entry
AT03_03125 CDS
T03425
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hav02000
]
AT03_03125
Transporters [BR:
hav02000
]
Other transporters
Pores ion channels [TC:
1
]
AT03_03125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MerT
PX
Motif
Other DBs
NCBI-ProteinID:
AIU71480
UniProt:
A0A097QYC8
LinkDB
All DBs
Position
complement(668586..671903)
Genome browser
AA seq
1105 aa
AA seq
DB search
MRLITKLLITGLLMLSLPLSANAALNEQQLAQELKQAESNKNTPNQAELVEALQSALNWI
NESKESAQRTQQYQKSISDFPKLTRELRQQLSDESTPPLPAASIPASDAEQQILQISSQL
LEVSRQLQQELDRSRAISDSLSQVPLKQATARKDLTEAERRLQNLVVTSTPLAQAQSNQL
QAEVAARKALVDELELEQLSANNRQELARLQADVLRKRHERLDLQLQDLRNSLNTQRQRE
AEQALERTQQLVEQSGDLPKSISEQLKINQDLSRALNEQAARMDDIANQQRTAAAQTIQV
RQALSTIREQAQWLGVSTALGETLRAQVARLPDMPKPQQLDGDMAKLRVQRLSFENLLNK
IEPAADYKQNDGKPLTASQQRLLQPQLKTQRELLNSLLSGCDSQILELTKLKVANTQLID
ALTEIKDATHRYLFWAADVDPLGVSAPLDVIQSLNRLLSLDTLSQLSQAFLMMLTTKETL
LPLFGALLLVGFSFYSRRHYQAFMERASSKVGKVTQDHISLTLRTVFWSILVALPLPVLW
AALGYGLQNAWPYPMAVAIGDGVTAALPVLWAFMISAAFAHPNGLFIAHFRWEEQQVKRA
MRYYLMSIWLIVPLLMALVTFDNLDDRAFAGSLGRACFIMLCVALSLLTTSLKRAGIPLY
LNKQGDGENLINHALWWILLCAPLVAAFASLLGYFNTAQILLARLESSVAIWFILLVMYY
IIRRWMLIQRRRIAFERAKQRRAERLEKRTKGEEDSTPHSVEGSQDIEEPVVDLDAISAQ
SLRLVRSILTMIALVSLIWLWSELHSAFAFLENIRLWDVTSSSQGVESLQPITLGAVLIA
ILVMIVTVQLVKNLPALLELGLLQHLDLTPGTGYAITTITKYLLLLIGGLIGFSMLGIEW
AKLQWLVAALTLGLGFGLQEIVANFASGLIILFEKPIRIGDTVTIRDLTGSVTKINTRAT
TISDWDRKEIIVPNKAFITEQFINWSLSDAVTRVVLTVPAEATASSQEVTDVLLEAASKC
SLVLDTPAPEAYLVDIQQGIQIFELRIYAAEMAHRMPLRHEIHQLILAGFQQHDLKLPFP
PFQVSTDTLRQARGSMRRTFTTGGL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgattaccaaattgttgataaccgggttactgatgttatcccttccacttagt
gcgaacgccgcactgaatgagcaacagctcgcccaagaactcaaacaagccgaatccaat
aaaaatacccccaatcaggctgaactggttgaggcgcttcagagcgcacttaactggatc
aatgagagtaaagagtctgctcaacgtactcagcaatatcagaaatccatcagcgatttc
cccaaactcacgcgcgaactccgccagcagctcagcgatgaaagcactcctccgctgccc
gcggcatccataccggctagcgacgccgaacaacaaattctgcaaattagcagccaatta
ctcgaagtttcacgccagctacagcaagaacttgaccgttcgcgtgccatcagtgattcg
ttaagtcaggttccactcaaacaggctaccgcccgcaaggacttaaccgaggccgaacgc
cgtctgcaaaatctggttgtcaccagtactccgttggcacaggcgcaatcaaaccagcta
caggccgaggtcgcagcgcgtaaagcgctagtcgatgagctagaactggagcagctttct
gccaataaccgtcaggaattggcacgtttacaggcagatgtactccgcaagcgccatgag
cgcctcgatcttcagttacaggatttacgtaactcgctgaatactcaacggcaacgtgaa
gccgaacaagccttagaacgaactcagcaattagttgaacaaagcggggatttgcccaaa
tcaatttccgaacagctgaaaatcaatcaggatctctcgcgtgcattgaatgagcaagcg
gcgcgcatggatgatattgccaaccaacagcgaaccgccgcagcgcaaaccattcaggta
cgtcaggctctcagcaccattcgtgaacaggcccaatggctaggagtttccaccgcgttg
ggggaaacgctacgtgcgcaggttgcgcgtttgcctgatatgcctaaaccgcagcaactc
gatggcgatatggccaaactgcgcgtgcagcgtctatcctttgaaaacctgctcaacaaa
attgaaccagccgccgactataagcaaaacgatggtaagcctttaacggcttcacagcag
cgtttgttacagccccagcttaaaacacagcgcgagttactgaactcgctgctttctggc
tgtgattcgcaaatcctagaattaaccaagcttaaagtcgccaacacccagcttattgat
gcgctgaccgaaattaaagacgccacccaccgctatcttttctgggcggcggacgttgat
cctctcggcgtgagtgcaccgctcgacgtgattcagagcctcaaccgcctgctgtctctg
gatacgctttctcagcttagccaagcgtttctcatgatgctcaccaccaaagaaacgctg
ttgccgctgtttggtgccctgctactggttggcttcagtttttattctcgccgccattat
caggcctttatggagcgcgccagcagcaaggtcggtaaggtgacccaagaccatatttcg
ctcacgctgcgcacggtgttctggtcaattctcgtggcgttgccgctgccggtgctgtgg
gcggcgttaggttatggattacaaaatgcatggccctacccgatggccgttgccattggt
gatggcgtaacggccgcgctgccagtgctgtgggcatttatgatcagcgccgcatttgct
catccaaacgggctattcattgcgcatttccgttgggaagaacaacaggttaaacgcgca
atgcgctactacctcatgtcgatttggctgatcgtgccgctcttgatggcgcttgttacc
ttcgataatttagacgatcgcgcctttgcaggatcgctggggcgcgcctgtttcatcatg
ctttgcgtggcgctcagcctactaaccaccagcctcaagcgcgcaggtattccgctttat
ctcaacaaacagggcgacggcgaaaacctgatcaaccacgcgctatggtggattttgctg
tgtgcaccgctggtagccgctttcgcttctctgctgggctacttcaacacggcgcaaatt
ttattagcccgtttagagagctcagtggccatctggttcatcttgctggtaatgtattac
atcattcgccgttggatgttgattcagcgccgccgtatcgcctttgagcgagccaaacag
cgccgcgcagagcgtttagaaaagcgtaccaagggtgaagaggactcgactccgcacagt
gttgaaggaagtcaggacattgaagagccagtggtcgatctcgacgctatcagcgctcaa
tcgcttcgtttggttcgttcgattcttaccatgattgcgctggtctcgctgatctggctg
tggtctgaactgcattcagccttcgcgtttttggaaaacattcgtctgtgggatgtcacc
agctcatcgcagggggttgaaagcctgcagcctattacgctcggggcagtgctaatcgcg
atattagtcatgatcgtcacggtgcagctcgtcaagaatctgcccgcgctgctggagctt
gggttgctgcaacatcttgatctaacgccaggtaccggatacgccattactaccatcacc
aaatacctgttgttgttgattggcggcctgattggtttctcaatgctgggcattgagtgg
gcaaaattacaatggttggtcgccgcgctgaccttaggtttgggcttcggtttacaggag
atcgttgctaactttgcctccggcttgatcatcctgtttgaaaaaccgatccgcatcggt
gataccgtgaccatacgcgatctcacaggatccgtgaccaaaatcaatacgcgcgccacc
acgatttcagactgggaccgcaaagagatcattgtgcccaacaaggcctttatcaccgag
cagtttatcaactggtcattaagcgatgccgtcacccgtgttgtgcttaccgtgcctgcc
gaggcaacagcaagcagccaagaggtcacagacgttctgcttgaagcagcatcaaaatgc
tcgctagtgctcgatacgcctgcgccagaggcttatctggtggatatacagcaagggatc
cagattttcgagctgcgtatttatgccgctgaaatggcgcaccgtatgccactgcgtcat
gagatccatcagttgatcttggctggcttccagcagcacgatctgaagctgccgttccca
ccgttccaagtgagcactgatacattgcgacaggcgcggggaagtatgagaaggacgttt
acgacgggggggttatag
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