Hafnia alvei: AT03_03140
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Entry
AT03_03140 CDS
T03425
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hav
Hafnia alvei
Pathway
hav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT03_03140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hav03019
]
AT03_03140
03009 Ribosome biogenesis [BR:
hav03009
]
AT03_03140
Messenger RNA biogenesis [BR:
hav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AT03_03140
Ribosome biogenesis [BR:
hav03009
]
Eukaryotic type
Pre-60S particles
RNases
AT03_03140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIU71483
UniProt:
A0A097QYC6
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All DBs
Position
674594..675139
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AA seq
181 aa
AA seq
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MSGSETNLIWIDLEMTGLDPEVDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDE
WNVRTHTGSGLVDRVKASTIDDATAAQKTIEFLQQWVPAGVSPICGNSVGQDRRFLFRYM
PELEKYFHYRYLDVSTLKELARRWKPEILPGFKKQGTHQALDDIRESVAELAYYRENFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagtgaaacaaatttaatctggatcgatttagaaatgacggggctcgatccc
gaagtcgatcgcatcattgagattgcgacgttggtgaccgatgccaatttgaatattctg
gcggaagggccggtgattgcggtacaccaatcggatgagcagctggcgctgatggatgag
tggaacgtgcgcacccataccggcagcggcttagttgatcgtgtcaaagccagcaccatc
gatgacgcaaccgcagcacagaaaaccattgagttcctacagcagtgggtgcccgcgggc
gtttctccaatctgcggtaatagcgttgggcaggatcgtcgcttcctgttccggtatatg
cctgagttggaaaagtatttccactaccgctatctggacgtgagtacgctaaaagaattg
gcgcgtcgctggaaaccagagattttgcctggttttaaaaagcagggcacgcatcaagcc
ttagatgacatccgcgaatccgtggccgagttggcttattaccgtgaaaactttatcaag
ctttaa
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