Hafnia alvei: AT03_03500
Help
Entry
AT03_03500 CDS
T03425
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hav03016
]
AT03_03500 (truB)
Enzymes [BR:
hav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AT03_03500 (truB)
Transfer RNA biogenesis [BR:
hav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT03_03500 (truB)
Prokaryotic type
AT03_03500 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
FoP_duplication
Motif
Other DBs
NCBI-ProteinID:
AIU71548
UniProt:
A0A097QYJ1
LinkDB
All DBs
Position
743997..744950
Genome browser
AA seq
317 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKHQGLSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG
ESTKFSQFLLDADKRYRVIARLGQRTNTSDADGEVVQERPVEFTQEQLDAALEQFRGDSQ
QIPSMYSALKHQGKPLYEYARQGIDVPREARDIMVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEVLGCGAHVIYLRRVQVSNYPSERMVSLEQLQQMVAAAEEAGVEPRTVLDPL
LLPMDTAASHLPEINLTDVVAAYVLQGQPVQVQGLPAEGMVRINVGEKRRFIGVGEVDDQ
GRLAPRRLVVEERVPEE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacctcgccgtcgcggccgtgatattaacggcgttctgttattagacaaacac
caaggtctatcctcaaatgacgttttgcagaaagtaaaacgcatctataacgccaacaaa
gcaggccataccggtgcgctagatcctttagcaaccggtatgctgcctatttgcttaggc
gagtcgaccaaattttctcagttcttactggatgccgataaacgctaccgcgtgattgcg
cgtttagggcaaagaacaaatacctcggatgccgatggtgaagtggttcaggaacgtcct
gtggaatttactcaggaacaactggatgcggcgctggagcagtttcgtggtgatagccaa
caaatcccatcgatgtactctgcgcttaaacaccaaggtaagccgctgtatgagtatgcg
cgtcagggcattgatgtcccacgcgaagctcgcgacattatggtgtatgaactgcagttt
attcgctgggaaggcgatgagttagagttagaaatccactgctcgaaaggtacttacatc
cgaaccatcattgatgacttgggtgaggttttaggctgtggtgcacacgttatctattta
cgtcgcgtgcaggtttctaattatccgtcggagcgcatggtttctctggagcaattgcag
caaatggttgccgctgccgaagaggctggtgttgaacctagaacggttctcgatccgctg
ctgttgccaatggataccgctgcatctcatttgccggaaatcaatctaaccgatgtggtt
gccgcctatgttcttcaaggacagccggtgcaggtgcaaggtttgcctgctgaaggtatg
gtgcgcatcaatgtgggtgagaaacgtcgatttatcggcgttggcgaagtggatgaccaa
ggacgcttggccccacgtcgcctagtagtagaagagcgcgttcctgaagagtaa
DBGET
integrated database retrieval system
