Hafnia alvei: AT03_03905
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Entry
AT03_03905 CDS
T03425
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
hav
Hafnia alvei
Pathway
hav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT03_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_03905
Enzymes [BR:
hav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
AT03_03905
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT03_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIU71625
UniProt:
A0A097QYU6
LinkDB
All DBs
Position
827003..827500
Genome browser
AA seq
165 aa
AA seq
DB search
MLQDIIAPDLRVIFCGINPGLSSAHQGFHFANPTNRFWKVIHLAGFTQRQLAPQDEQHLL
DTGCGITALVSRPTVTAAEVTRAELRAGGDALEEKILRYQPQSIAILGKQAYTQAFGARK
VEWGRQEKVIGKTQIWVLPNPSGLSRITVDELVASYRVLNDALGR
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacattatagctcccgaccttcgtgtcattttttgtgggatcaacccggga
ttaagttcggcgcatcagggttttcattttgctaatccgacaaatcgcttctggaaagtt
attcatctggctggattcacccagcggcagctggctccgcaggatgagcagcatctgttg
gataccggctgtggtatcactgcactggtttctcgcccaaccgtcacggccgcggaagtg
acgcgtgcagagctacgtgcaggcggtgacgcgcttgaggagaagatcctgcgctatcag
ccgcaatctatcgctatcctcggcaagcaggcgtacacgcaggcatttggcgctcgaaag
gtggagtgggggcggcaagagaaggtgattgggaaaactcaaatttgggtgctgccaaac
ccgagtggtctgagccgtattaccgttgatgaactggtggcgagctatcgggttctcaat
gatgcacttggtcgataa
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