Hafnia alvei: AT03_04450
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Entry
AT03_04450 CDS
T03425
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hav03036
]
AT03_04450 (xerD)
Chromosome and associated proteins [BR:
hav03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
AT03_04450 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Usp
DUF7117
Motif
Other DBs
NCBI-ProteinID:
AIU74770
UniProt:
A0A097R7R8
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Position
947385..948284
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AA seq
299 aa
AA seq
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MHEQDQALIEQFLDALWLERNLAANTLASYRLDLRSLAEWLAHHHSDLLQAQVSDLQSFL
AERVDGGYKATSSARLLSAMRRLFQYFYREKMRSDDPTTLLSSPKLPQRLPKDLTEEQVD
TLLQTPSVENPIELRDKAMLEVLYATGLRVSELVGLTQADVSLRQGVVRVIGKGNKERLV
PLGEEAVYWIEYYLEYGRPWLLNGQTIDVLFPSNRAQQMTRQTFWHRIKHYAVLAGIDSS
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgagcaagatcaggcactgatagaacaatttttagatgcgctgtggttagagcgc
aacttagccgcaaatacgctggcctcttatcgtttagatttacggtcgctggctgaatgg
ctggcgcatcatcattctgatttattacaggctcaggtttctgatctgcaaagtttctta
gctgaacgcgttgatggcggctataaagcgaccagctctgcccgtttacttagcgccatg
cgtcgtttatttcagtatttctatcgtgaaaaaatgcgcagcgacgatccgacgacgtta
ttatcgtcgccaaagctaccgcagcgactgccgaaagatctcaccgaagagcaggttgat
acgctgctgcaaacaccaagcgttgagaacccaatagaactgcgtgataaggcgatgctt
gaagtgctttatgccaccggactccgcgtttctgaactggtggggctgacgcaggccgat
gttagcttgcgtcagggcgtggtgcgcgttattggtaaaggtaataaagaacggctggtt
ccgctgggagaagaggcggtttactggattgagtattatctggaatatggtcgaccatgg
ctgctgaatgggcaaacgatagacgtgctgtttcccagtaatcgtgcccagcagatgacg
cgccaaacgttttggcatcgcattaagcattatgcggtactggcgggcatcgatagctcg
cgtttgtctccgcatgtgctcaggcacgcttttgccacccatttgctgaaccatggggca
gatttgcgtgtcgtacaaatgttgttaggacatagcgatctgtccacaacccaaatttat
acgcatgtagctactgaacgactgaagcagctacatcaacagcatcatccccgtgcgtaa
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