Hafnia alvei: AT03_05855
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Entry
AT03_05855 CDS
T03425
Name
(GenBank) recombination and repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_05855
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AT03_05855
TLS (translesion DNA synthesis) factors
Other SOS response factors
AT03_05855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_15
AAA_22
FKBP15
HAM1_C
Motif
Other DBs
NCBI-ProteinID:
AIU71957
UniProt:
A0A097QZR0
LinkDB
All DBs
Position
complement(1263994..1265655)
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AA seq
553 aa
AA seq
DB search
MLTQLTISNFAIVRELEIDFQRGMTAITGETGAGKSIAIDALGLCLGGRSEAAMVRLNTP
RADICARFSLADTPSARQWLEQNQLDDSNECLLRRVISADGRSRGFINGTAVPLSQLREL
GQHLIQIHGQHAHQLLLKSEHQKHLLDAYSNQSELLAEMQAAYRQWHHSCRLLAHHQKQV
AERESRKQLLQYQLKELNEFAPQPGEYEQIDEEYKRQANSGQLLTISQRALNMLSDADDA
NILSLLHSAKQNVSELISYDSQFSPLLDMLEEASIQISEASNELRHYGDTIDMDPARLYE
LEQRISRQIALARKHHVTPEELPQFYQQLLDEQQSLSQQESDQEQLAENVHKHHEYALSL
AQQLHQQRVNFAQELSQLITHSMHELSMPHGQFAIDVNFMPEALTADGADRIEFSVTTNP
GQPLQALAKVASGGELSRIALAIQVITAQKMDTPALIFDEVDVGISGPTAAIVGKMLRQL
GESTQVMCVTHLPQVAGCGHQHFYVSKHTDGSETETTMQSLDKKARLQELARLLGGSEVT
RNTLANAKELLAA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgcagctgaccatttctaactttgctattgttcgtgaacttgaaattgacttc
cagcgtggaatgaccgccatcaccggcgaaacaggcgcgggtaagtcgattgctattgat
gcgctaggtttatgccttggagggcgctcagaggccgctatggtgcgtttaaacacgcct
agagccgatatctgcgcacgcttctctctggcggatacgccgtcagcacgacagtggctt
gaacaaaatcagctagatgacagcaatgaatgcctgctacgacgcgttatcagcgccgac
gggcgttcccgcggatttatcaatggcaccgcggttcctctttcacagctacgcgaactt
ggccaacatctgattcagattcatggccagcatgcgcatcagttgctgctcaagtccgag
caccaaaaacacctgctcgatgcctatagcaaccaatctgagctattagcagaaatgcaa
gccgcctatcgccaatggcatcacagctgccgtctgctggctcaccatcaaaagcaggtt
gccgagcgtgaatcgcgcaaacagctactgcaatatcagctcaaggaactcaatgagttt
gctccccagcccggagagtatgagcagatcgatgaagagtataagcgccaagccaatagc
ggccagcttctgaccatcagccagcgcgcattaaacatgctgtctgatgccgacgatgcc
aatattctcagcctgctgcacagcgcaaaacaaaacgtgtctgagctgattagctacgac
agccagttttcgcctctgctagatatgctggaagaagcttcaattcaaatatctgaagcc
agcaatgaactgcgccattacggcgatacgattgatatggatcctgctcggctttatgag
ttagagcagcggatatcccgccaaattgcgctggcgcgtaaacaccatgttacgccagaa
gaactgcctcagttttatcaacagcttttggacgagcagcagtcactcagccaacaggag
agcgatcaagaacagttggctgagaacgtacacaaacatcatgagtacgcgctttcgctc
gcgcaacagttgcaccaacagcgggtgaatttcgctcaagagctttctcagctcattaca
cacagcatgcatgaactctctatgcctcatggacagtttgcaattgatgttaatttcatg
ccagaagcactcaccgcagatggcgcagaccgcattgaatttagcgtaaccaccaaccct
ggccaaccactccaagcattagctaaagtggcttctggtggtgaactctcacgtattgcg
ctagcgattcaggtcattactgcccagaaaatggatacgcctgcacttatctttgatgaa
gtggatgtggggatcagtgggccaactgccgctattgttggaaaaatgctgcgccagctt
ggcgaatcaacgcaggtcatgtgtgtcacccacttacctcaagtcgccggatgtgggcac
cagcatttttatgtcagcaagcacactgatggttctgaaactgaaacaaccatgcaatca
ttggataaaaaagcgcgtttgcaagagctggcgcggctgttagggggaagtgaagtgacg
cgcaacacgctggcaaatgcaaaagaactgcttgccgcataa
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