Hafnia alvei: AT03_05955
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Entry
AT03_05955 CDS
T03425
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hav03009
]
AT03_05955 (rumA)
Enzymes [BR:
hav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AT03_05955 (rumA)
Ribosome biogenesis [BR:
hav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AT03_05955 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
RrnaAD
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Methyltransf_4
FtsJ
Methyltransf_15
Cons_hypoth95
Methyltransf_23
CMAS
MetW
Motif
Other DBs
NCBI-ProteinID:
AIU71977
UniProt:
A0A097QZT0
LinkDB
All DBs
Position
1285948..1287264
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AA seq
438 aa
AA seq
DB search
MAQFYSPGRRVATRQTITVTATDLDPFGQGVARHNGKAIFTSGLLPDEQAEVTLTEDKKQ
FARAKVKRLLTRSPERVAPRCPHFGTCGGCQQQHASEPLQQRSKSASLQRLISRETGLDI
IPESVISGPEYGYRRRARLGLQFQPKQQQLVMGFRKSGSNDLVPIKACPVLAPALASLLQ
PLHECLAEMKAARRLGHAELVLADNGPVLVLRHLDPLKEQDLAQLHNFSAQHRVMLYLQG
NDDELVKLCDGAPFYQVDGLRLFFSPRDFIQVNDAVNQQMVAQALEWLEVESTDRVLDLF
CGMGNFTLPLAKRAKQVVGVEGVATLVANGLYNAQINALNNVEFFQHNLEEDVTLQPWAK
LGFDKVLLDPARAGAAGVMGHIVKLAPQKVVYVSCNPTTLARDSQILIAAGYQMARVRML
DMFPHTGHLESMALFVAS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctcaattttactctccgggacgccgtgtggcgacccgacaaaccataactgtgacg
gcaaccgaccttgatccttttggtcagggtgttgcgcgccacaatggtaaagctatcttt
acttctggcctattgccagatgagcaagccgaagtcacgttaaccgaagataaaaagcag
ttcgctcgcgccaaagtgaagcgtttactcactcgcagtccagagcgtgtcgcgccacgc
tgcccacattttggcacctgtggcggctgccaacagcaacatgccagtgagcctctgcaa
cagcgcagtaaatcggcttctctccagcgcctgattagccgcgaaacgggtttggatatc
ataccagaatccgttattagcgggccagaatacggctaccgtcggcgtgcgcgtttagga
ttgcagttccagccgaaacaacagcagctggtgatggggtttcgcaagtcaggttctaat
gatttagtgcctattaaagcgtgccctgtattagcgcccgcgctggcatcgcttttgcaa
ccgctgcatgaatgtctggccgaaatgaaggccgctcgccgtttaggccatgccgagctg
gtgttagccgataatggccccgtgttggtattgcgccatcttgatccgttgaaagaacaa
gatttggcccaattgcacaattttagtgcgcagcatcgcgttatgctctacctgcaaggt
aatgacgacgaactggttaagctgtgcgatggcgcaccgttttatcaggtcgatgggctg
cgtttattttttagcccaagagattttattcaggtcaacgatgccgtgaatcaacagatg
gttgcgcaggcgttggagtggctagaggtagaatcgaccgatcgcgtgttagatctgttt
tgcggtatgggcaacttcacattaccgttagcaaaacgcgcaaaacaggtcgttggcgtt
gaaggtgttgctacgctggtggcaaatggtctgtataatgcccagattaatgcattgaat
aacgtcgagttcttccagcacaacttggaggaggatgtgactctgcagccatgggctaaa
cttgggtttgataaagtgttgttagatccagcgcgagccggcgccgcaggcgtcatgggc
cacattgttaaactggcaccgcagaaggtggtttatgtttcctgtaatcccaccacgctg
gcgcgtgacagtcagattttaatcgccgcgggttaccaaatggcgcgcgtgcgaatgcta
gatatgtttccccacacggggcatttagagtcgatggcgttgtttgttgcgtcgtag
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