Hafnia alvei: AT03_07680
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Entry
AT03_07680 CDS
T03425
Name
(GenBank) transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hav03000
]
AT03_07680
Transcription factors [BR:
hav03000
]
Prokaryotic type
Helix-turn-helix
Other families
AT03_07680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
NACHT
AAA_22
AAA_14
AAA_16
EIIA-man
AAA_2
IstB_IS21
nSTAND3
AAA_24
RNA_helicase
AAA_18
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIU72276
UniProt:
A0A097R0N2
LinkDB
All DBs
Position
1649418..1652210
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AA seq
930 aa
AA seq
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MKRIDRICQELERLTLGLSQTDLQNDVAFTAESIGFNLGLARNSVSKDLNQLWSEQRVIK
VKTRPVYFLHREVVETLIGHVLPDHLTEVRFVSELLPSEDPLIASDPFTALIGYDRSLKL
AVEKGKAAVLYPSGLHVLLTGPSGVGKTYFAELMHQFACQQSGNNALPMVYFNCAEYAHN
PELLSSHLFGHRQGAFTGATSDKTGLIEQADGGYLLLDEIHRLPYEGQEKLFALLDKGEF
RALGSSHKARAVSVRLICATTEPVNSTLLRTFQRRIQVSIDLPALRERSMEEQIELITGF
LHQESRKISRTIRVDKALLLWLLEKPLEGNIGQLKSDIQFLCAQGWAAGMGQQHDVLTLD
KKLVEQSVMPSADQRLLVDSIFGQQQWLDISADTLSALKPSLGAAVGQEDSDLFYRFLTR
EYVNLRNSNVPPQETLAILKNKLRSIFEYGLYSRDTATVGYSGQLEQRLALLIGYVEQVV
GFTLPENMVNHLRKHFLTLLSYVQRGLIPQLYSSSLILDHCKDEYDNAMQLCRRIDEIFN
IQCPATEVVYLCMFLKECRQHRCEIDDSPELGVIFIAHGATTATSMAQYVNQVLERELLT
AIDMPFEQSVHDTLEVLTNLIRSRGYRRVILMVDIGSLVHFGSAISKLFQFEVLLLPNMT
LTSLLEIGLDLTYESSDFAALNALMQEKQIPCHWCSPEQAGAGKVLVVSCITGMGTAEKI
HKVLSESFGELMAQDTRLLILDYNEVRSLDRIQQVLAPHERLVGIVGTFQPGLPDIPFIS
LEEMFSEQGPELLLSLLNPDLSTQERRLEVERSSMRFISALTLESIINQISVLNPRRILQ
EMESVLQRICQASDLKPSRQVTLRFLIHCCCMVERIVISRKPLQMALETQQDIDAAAMSV
IKQAFAPIEEAYAIRLSDAEFIYIYELLYR
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatagacagaatttgccaggaattagaacgcttaacattaggcctaagccag
accgatttgcaaaacgacgttgctttcaccgctgaaagtattggttttaatcttggcctc
gcgcgtaattcagtaagcaaagatcttaaccaactgtggagtgagcaacgggttattaag
gtaaaaacccgcccggtttatttcctccatcgcgaggtggtagaaacactcattggtcat
gtgctaccggaccatctcaccgaggttcgttttgttagcgaattattgccaagtgaagac
ccgcttatcgccagcgatccttttaccgcgctgattggttatgaccgcagcctgaaattg
gcggtagaaaaagggaaggccgcggtactctatcccagcggattacatgttttgctgacc
ggcccgtcgggcgtggggaaaacctattttgccgagctgatgcatcagtttgcctgccag
caaagcggtaataacgcactgccgatggtctatttcaactgtgctgaatatgcgcacaac
cctgaacttctctcttctcatctttttggccacaggcagggcgcttttaccggcgcaacc
agcgacaaaactgggcttattgagcaggctgacggtggctatctgctgctggatgaaatt
catcgccttccttatgaagggcaagaaaaactgtttgccctgttagataaaggtgaattt
cgggcattgggttcgagtcataaggcacgagcggtgagtgtgcgcttaatctgcgccacc
acggagcccgtgaattccacgttgctacggacttttcagcgacgtattcaggttagtatc
gatctgcccgccttacgcgagcgttcaatggaagagcaaattgagctgattactggattc
ctgcatcaggaaagtcgaaaaatcagccgcaccattcgggtcgataaagcactgctgctg
tggctgctagaaaaaccgttggaaggcaatattggccagttgaaaagtgatatccaattc
ttgtgtgctcagggctgggcggcaggcatggggcagcaacacgatgtgctgacgttggat
aaaaagctggtagagcagtcggtgatgccgagcgcggaccaacgcttgctggtcgatagc
atatttggtcaacaacaatggctggatatcagtgcagacaccctatctgcgctgaaaccc
tcgttgggcgcggccgtggggcaagaagacagcgacctgttttaccgttttctgacgcgt
gaatatgtcaacctacgcaacagcaacgtgccgccgcaggaaacgctggctatcctcaaa
aataaactacgttcgatatttgaatatggtttgtacagccgtgacactgcgactgtcggc
tacagcggccagcttgagcagcgtttagcgctgctgattggctacgttgagcaggtggtt
gggtttactctgccagaaaacatggttaaccatctgcgtaagcacttccttaccttgctg
agctatgtccagcgcggtttgattcctcagctttactcttcaagtctgatattggatcac
tgcaaagacgaatacgataacgcgatgcagctttgccgtcgcatcgatgaaatatttaat
attcaatgccctgcgaccgaagtagtttatctgtgcatgttcctgaaagagtgccgccaa
caccgctgtgaaattgacgatagccccgaacttggcgtgatttttattgcccatggtgcc
acgacggctaccagtatggcgcagtatgtgaatcaggttttagagcgtgaactgctcacc
gcgattgatatgccgttcgagcagtcagtgcatgacaccttggaagtgcttaccaacctg
atccgcagccgtggctaccggcgcgtgattctgatggtcgatatcggttcactggtccat
tttggcagcgccatcagtaaattgttccagtttgaagtgttgctgttgccaaacatgacg
ctaaccagcctgttggaaattggtctggatttgacctatgaatctagcgattttgccgcg
ctgaatgcgctaatgcaggagaaacaaattccgtgccattggtgttcgcccgaacaagcc
ggtgcgggaaaagtgctggtggtttcctgcattaccggtatgggaaccgcagagaaaatc
cacaaggtactgtcagaaagctttggtgaactgatggcgcaggatacgcgcttattaatt
ctggattacaacgaggttcgcagcctagaccgtattcagcaggtgctggctcctcatgaa
cggctggtgggtattgtggggacgttccaaccgggattgccggacattccctttatctcg
ctggaagagatgttttcagagcaaggccccgagctgctgcttagcttgttaaaccccgat
ctcagcactcaggaacgccgcttagaagttgaacgtagctcaatgcggtttatcagtgcg
ctaacgctcgaaagtatcattaatcagatttcggttctgaaccctcgccgtatcttgcag
gaaatggagagcgtcttgcagcggatctgtcaggcctcagacctcaaaccgagccgacag
gtgacactacgcttccttatccactgctgttgcatggtggagcgtatcgtgattagccgt
aaaccgttacagatggcgctggaaactcagcaagatattgatgctgccgctatgagtgtc
atcaaacaggcgttcgctcctattgaggaggcgtatgccattcgtttatctgacgcagaa
ttcatttatatttacgagcttctctaccgctag
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