Hafnia alvei: AT03_07790
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Entry
AT03_07790 CDS
T03425
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hav03009
]
AT03_07790 (rimO)
Enzymes [BR:
hav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AT03_07790 (rimO)
Ribosome biogenesis [BR:
hav03009
]
Prokaryotic type
ribosomal protein modification factors
AT03_07790 (rimO)
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AIU72298
UniProt:
A0A097R0N4
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Position
complement(1673338..1674654)
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AA seq
438 aa
AA seq
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MHQPRIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVLEHVHQYVPKPTHNP
FTSLVPEQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGVDVKHRTGFWNGQPVKTSMIGLCEQLSTLGVWIRLHYVYPYPHV
DDVIPLMAEGKVLPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPQLTLRSTF
IVGFPGETEEDFQMLLDFLTEAKLDRVGCFKFSPVEGATANELADQVPEEVKEERFHRFM
QLQQQISAQRLKDKIGLTLPVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETTLKIGDVV
NVTIENVDEYDMWGSVSA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaccgcgtattggttttgtgtctctgggctgcccgaaaaacctagtggactcc
gaacgtattctgaccgaactgcgcaccgaaggttatgatgtagtcccccgctacgacgac
gccgaactcgtaatcgtgaacacctgcggttttatcgacagcgccgtgcaagaatcgtta
gaggctatcggtgaagcgctcaacgaaaatggcaaagtgattgttaccggctgcttaggg
gcaaaagagaaccagatccgcgaagttcaccctaaagttttggaaatcacggggccacac
agctacgaagccgtgcttgaacacgtacaccagtatgtgccgaaaccaacgcataatccg
tttaccagtttggtgccagaacagggtgtcaaactcacgccgaaacattacgcttacctg
aaaatttctgaaggctgtaatcatcgttgcacgttctgcatcattccatccatgcgcggc
gatctggacagtcgtccgattggttccgtattggatgaggcaaaacgtttggttgatgcg
ggcgtcaaagaactgctggtcatctcgcaggatacgtcggcctacggcgttgacgtcaaa
caccgcaccggattctggaacggacagccggtgaaaaccagcatgatcggcctatgtgaa
cagctttccacactcggcgtttggatccgcttacattacgtttacccttatccgcacgtt
gatgacgtcattccattgatggcagaaggcaaagtgttgccgtatctggatattccactt
cagcacgccagtccaaaaatccttaaactgatgaagcgccctggcgcagttgaacgcacc
cttgagcgcattaaacgctggcgcgaaatttgcccgcaactcacgttgcgttcgacgttt
atcgttggattcccaggtgaaactgaagaagacttccagatgctgctcgatttcctgact
gaagcgaaactcgaccgcgttggctgtttcaaattcagcccggttgaaggggctaccgcc
aatgaattggctgaccaagtgccggaagaagtgaaggaagaacgtttccaccgctttatg
cagcttcagcaacaaatttcagcccagcgtctgaaagacaaaattggcctgacacttccc
gttatcattgatgaagtagacgaagaaggtgctattggccgcagcatggctgatgcacct
gaaatcgacggcgcggtttatctcaacggtgaaaccaccttgaagatcggcgacgtggtt
aacgtcaccatcgaaaacgttgatgaatacgatatgtggggcagcgttagcgcctaa
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