KEGG   Hafnia alvei: AT03_08545
Entry
AT03_08545        CDS       T03425                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
hav  Hafnia alvei
Brite
KEGG Orthology (KO) [BR:hav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hav03400]
    AT03_08545 (helD)
Enzymes [BR:hav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT03_08545 (helD)
DNA repair and recombination proteins [BR:hav03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AT03_08545 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 DEAD ResIII
Other DBs
NCBI-ProteinID: AIU72434
UniProt: A0A097R121
LinkDB
Position
1857311..1859365
AA seq 684 aa
MELRATKMGQHLAQHPYNRVRLLNAGVEVSGDRHEYLIPFNQLVAIHCKRGIVWGELEFE
LPEAKVVRLHGTDWQETQRFYHHLQQSWQAWSDEMAQISADVLSAQVSELEQLNQQDRWL
KRSELTDICTMIKGCFEAIPLPQQRLEEFDSCRERYRYCLKWLNYGLKMVDERNQQWTTR
MLSEHAEFFEQVESQPLNSSQAQAVVNGENGVLVLAGAGSGKTSVLVARAGWLLLRKEAT
PEQILLLAFGRKAAEEMNDRIKERLHTADIQAKTFHALALQIINHTGKKTINISKLEGDA
QARQKLLVKTWQQECTAKKAQAKGWRQWLTEDLDWQVDEENYWQDKKLAMRLAPKLERWV
GLMREHGGSQAQMIEGAPEEIRDLFQKRIRLMAPLLKAWKAALKEEGAVDFPGLIQQAIA
VLDKGRFISPWKHILVDEFQDISPQRARLLEALRKQNSRTNLFAVGDDWQAIYRFSGAEL
TLTTAFTQHFGDSDRRELDTTYRFNRRIGEIANGFIQQNPHQLRKALNSLSEGPKKAVTI
LPQERLEDLLNKLSGYVKPEERILILARYRYLKPDVLDKAATRWPKLNIEFTTIHASKGQ
QADYVIILGLQEGKDGFPATTGESVIEQVLLPQSEDFPDAEERRLLYVALTRARHQVWLM
QDIDKPSVFVDQLKRLGAAVQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgagagcaaccaaaatgggccaacatctggctcagcatccttataaccgtgtc
agactgttgaatgcgggcgttgaggtgagcggcgatcgccatgagtaccttattccgttt
aaccaattggtcgccattcattgcaaacgaggcattgtgtggggcgaattagagtttgaa
ctccctgaagccaaagtggtgcgtttgcacggcaccgactggcaagagacgcagcgcttt
tatcaccacctacagcaaagctggcaggcgtggagcgatgaaatggcgcaaatcagcgcc
gacgtactttctgcacaggtctccgagctggaacaactcaatcagcaagaccgctggctc
aagcgcagcgaactcactgatatttgcaccatgattaagggatgtttcgaagccattcct
ttgccgcagcagcgccttgaagagtttgatagctgtcgagaacgctatcgctattgtctt
aagtggctgaactacggtctaaaaatggttgatgaacgcaatcagcaatggaccacgcgc
atgctgtcagagcacgccgagttcttcgaacaggtagaaagccagccgttaaattcctct
caagcacaggcggtggtgaacggtgaaaacggcgttctggtgttggccggtgccggtagc
ggaaaaacatccgtgctggtggcgcgcgcaggttggctattgctgcgtaaagaagccacg
ccagagcagatcctgctgctcgcctttgggcgtaaagccgcagaggagatgaacgatcgt
atcaaagagcgtttgcatacggcagatattcaggccaaaaccttccatgcgttagcgctg
caaattatcaaccacaccggcaagaaaacgatcaatatcagtaagcttgagggcgatgct
caggctcggcaaaagctgttggtgaaaacctggcagcaagagtgtacggcgaaaaaagcg
caggcgaagggctggcgccaatggttgaccgaagatctggattggcaggttgatgaggaa
aactactggcaggacaaaaagctcgcgatgcgcttagccccaaaattggaacgttgggta
gggctaatgcgtgagcatggcggttcgcaggcccagatgattgaaggtgcgccggaagag
attcgtgatttattccaaaagcgcattcgcctaatggctccgttgctcaaagcttggaaa
gcggcactaaaagaggaaggtgcagtagatttccctgggttgatacagcaggcgatcgcc
gtgttggataaagggcggtttattagtccgtggaagcacattctggtcgatgagtttcag
gatatctcaccgcagcgagcaaggctgcttgaagcgctacgtaagcaaaactcgcgcacg
aatttgtttgccgttggcgacgattggcaggccatctaccgtttcagcggcgcagaactg
acgctcaccaccgcgtttactcagcattttggcgacagcgatcggcgcgagctcgatacc
acatatcgctttaaccgccgtatcggcgaaatagctaacggctttatccagcaaaaccct
caccagctacgtaaagcgctaaatagcctgtctgaagggccgaagaaagcggtgacgatt
ctgccgcaggagcgtctggaagatttgctaaacaagctcagcggctacgtaaaacctgaa
gagcgcatcctgattctggcgcgttaccgctaccttaaaccggatgttttagataaagcc
gccacgcgctggcctaaactcaatatagagtttacgaccattcacgccagcaaaggacag
caggctgactatgtgattattttaggcttacaagagggcaaagatggcttccctgcgaca
acgggcgaatccgtcattgaacaggttctgttgccacagagcgaagacttcccagacgct
gaagaacgcaggctgctttatgtcgcgctaacgcgagcacgccatcaagtgtggctgatg
caggatatcgataagccgtcggtgtttgttgaccagctcaaacgactgggcgcagcggta
cagcggaagccataa

DBGET integrated database retrieval system