Hafnia alvei: AT03_09885
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Entry
AT03_09885 CDS
T03425
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hav03016
]
AT03_09885
Enzymes [BR:
hav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AT03_09885
Transfer RNA biogenesis [BR:
hav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AT03_09885
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIU72661
UniProt:
A0A097R1R3
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All DBs
Position
2155835..2156950
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AA seq
371 aa
AA seq
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MNYQLITTSSELKQVCEQASRHTYIALDTEFVRTRTYYPQLGLIQLFDGETLSLIDPLPI
TDWQPFVELLKNPDVTKLLHAGSEDLEVFIHDFQTLPTPMIDTQILAAFTGRPLSCGFAA
MVNEYLQVELDKSESRTDWLARPLTERQCEYAAADVFYLLPLAHKLIAEVAEAGWTDAAN
DECLALCRRRQEVVDPALAYRDITNAWQLRTRQLACLQKLAEWRINQARQRDMAVNFVVR
EENLWQVARYLPTSQGELGELGVSGPEIRFHGKTLVAMVAESANIPESEWPQPVERLVDH
SGYKHAFKELKAVVQNAAERSGLTAELIASRRQINALLSWHWKLKEEQPDLLQGWRADLL
GEQVRAILATL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgattaccaccagtagcgaacttaagcaggtttgcgagcaagcaagc
cgccacacttacattgcgctagacaccgaatttgttcgtacccgcacttactatcctcag
ctcggtttgattcagctttttgatggcgaaacgctgtcgctgatcgacccgttgccaatt
accgactggcagcccttcgttgaactgctgaaaaatcccgacgtcacaaagttactgcat
gcgggtagcgaagatctggaggtttttatccatgattttcagacgctgccaacgcctatg
atcgatacgcagattttggctgcctttacggggcgtccactttcttgtggttttgctgcg
atggtgaatgagtatttacaggttgaattagacaaaagcgaatcccgcactgactggtta
gcgcgtccactaaccgagcgccaatgtgagtacgctgccgctgatgtgttctatctgttg
ccgcttgcacataagcttattgcggaagtggctgaggctggctggacggatgccgcaaat
gacgaatgcttggccctgtgtcgtcgtcgccaagaagtggtggatcctgcattagcctat
cgtgatattactaacgcttggcagctgcgtacgcgtcagctagcgtgtttacagaaactg
gctgagtggcgtatcaatcaagctagacagcgtgacatggcggttaatttcgtggtacgt
gaagagaacctgtggcaggttgcgcgctatctaccgacctctcaaggcgaactaggcgag
ctgggggtgagtggccctgagatccgtttccacggtaaaacgctggtggctatggtcgct
gagtctgccaatatccctgagtctgaatggccacagccggttgaacgattggttgatcac
agtggctataagcatgcgtttaaagagctaaaagccgtagtgcaaaacgcggccgaacgt
agcggattaacggcggaactgatcgcttcgcgtagacaaataaacgcactgttaagctgg
cactggaagctgaaagaagaacagccagatttacttcaaggctggagagcggatttgctt
ggcgagcaggttagggccattttggctaccttgtga
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